Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0577 ATGGCGATGGTGGTTCTCACAACCCTTTTGGTCATCTTTGTGACTCTGTTATTGAAAGTCGCCTATGACACCATCTCATGTTACTGGCTCACTCCAATGCGCATCAAAAAAATCATGGAGAGACAAGGTGTGCGTGGCCCCAAACCCCGCTTTCTTATTGGCAACATCATAGACATGACCTCCCTTGTTTCGAGAGCAGTTTCTCAAGACATGAAAACCATCAACCATGATGTTGTTGGTCGTCTTTTGCCACATTTTGTTGCCTGGTCCAACCAATATGGAAAGAGATTTCTATATTGGAATGGTATAGAACCAAGGCTGTGCTTAACAGACACTGGATTGATCAAGGAGTTTCTGTCAAAGTACAGTACTATATCTGGGAAATCGTGGCAACAACAACAGGGGTCCAAACATTTCATTGGGCGGGGCTTGTTGATGGCAAATGGTGAAGATTGGCACCACCAACGTCACATGGTTGCCCCTGCATTCATGGGAGACAGACTTAAGGGCTATGCTGGGCACATGGTGGAGTGCACAAAGGATATGCTTCAATCACTGCAAAATGCGTTAGAGTGTGGCCAAACTGAGGTGGAGATTGGACAGTGCTTCACCAAACTCACTGCAGATATTATCTCAAGAACTGAGTTTGGTACAAGCTATCAGAAGGGGAAGCAAATATTCCATCTCCTCACACAGCTGCAGAGTCGTTGTGCTCAAGCAAGTCGCCATCTTTGCTTTCCAGGAAGCAGGTTTTTTCCTAGTAAGTATAACGGAGAGATAAAGTCCATGAAGATGGAGGTGGAGAGACTCTTGATGGAGATCATAGAGAGTAGGAAAGATTGTGTGGAGATGGGGAGAAGCAATTCTAATGGGAATGATTTGTTGGGTATACTCTTGGATGAGATCAAGAAGGAGGGTGGTAGCTTGAATCTACAGCTAGTTATGGATGAatgcaaaacatttttctttgcaGGACATGAAACCACTGCACTCTTACTCACTTGGACGGTTATGTTGCTAGCCAGCAATCCACATTGGCAAGACAAAGTCAGAGCTGAGGTCAAAGAGGTCTTCAAGGGGGAAACTCCATCAGTTGATCAACTCTCCAAGCTCACTCTGTTACACATGATAATTAACGAGTCAATGAGGCTCTATCCTCCCGCAACTGTGCTTCCTAGAATGGCTTTTAAAGACATTGATCTGGGTGACCTTCATATTCCTAAAGGTTTATCAATTTGGATTCCAGTGTTGGCCATTCATCATAGTGAAGAACTATGGGGTAAAGATGCAAATGAGTTCAACCCTGAGAGGTTTGCCTCAAAGTCATTCATGCCAGGACGTTTTATACCATTTGCTTCTGGCCCTAGAAATTGTGTTGGACAATCATTTGCTATGATGGAAGCTAAGATTATATTGGCCATGTTGATCTCTCGGTTTAGCTTCACCATTTCGGAGAATTATAGGCATGCACCAGTGGTTGTCCTCACAATTAAGCCCAAATATGGTGTTCATGTTTGTTTGAAGCCTTTAGATCCATAA 1539 0.4334 MAMVVLTTLLVIFVTLLLKVAYDTISCYWLTPMRIKKIMERQGVRGPKPRFLIGNIIDMTSLVSRAVSQDMKTINHDVVGRLLPHFVAWSNQYGKRFLYWNGIEPRLCLTDTGLIKEFLSKYSTISGKSWQQQQGSKHFIGRGLLMANGEDWHHQRHMVAPAFMGDRLKGYAGHMVECTKDMLQSLQNALECGQTEVEIGQCFTKLTADIISRTEFGTSYQKGKQIFHLLTQLQSRCAQASRHLCFPGSRFFPSKYNGEIKSMKMEVERLLMEIIESRKDCVEMGRSNSNGNDLLGILLDEIKKEGGSLNLQLVMDECKTFFFAGHETTALLLTWTVMLLASNPHWQDKVRAEVKEVFKGETPSVDQLSKLTLLHMIINESMRLYPPATVLPRMAFKDIDLGDLHIPKGLSIWIPVLAIHHSEELWGKDANEFNPERFASKSFMPGRFIPFASGPRNCVGQSFAMMEAKIILAMLISRFSFTISENYRHAPVVVLTIKPKYGVHVCLKPLDP 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0577 512 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g0577 512 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g0577 512 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g0577 512 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g0577 512 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g0577 512 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g0577 512 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g0577 512 PANTHER CYTOCHROME P450 FAMILY MEMBER 3 506 - -
Ssu9g0577 512 SUPERFAMILY Cytochrome P450 46 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g0577 512 PANTHER CYTOCHROME P450 FAMILY PROTEIN 3 506 - -
Ssu9g0577 512 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g0577 512 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g0577 512 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g0577 512 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g0577 512 Pfam Cytochrome P450 86 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g0577 512 Gene3D Cytochrome P450 28 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0577 Ssu-Chr9 27077674 27083949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0577 1 372 Cytochrome P450 AT5G38450 67.905 9.06e-176 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0577 K10717 - gmx:100812567 965.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g0577 9 27077674 27083949 Ssu9g0577 9 27077674 27083949 ECH