Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0571 ATGAGAGTGGATCCACGACCCAACTTCTGCCTATCTAATAAAACGCGAAGCACCTTCCTCAAGAACCCTAATTCCACCGCAGTCTCCGAGTTAGGATTTCTGAAGCCACGAAACAGTAGGAGAGACAGGGAAATGGCTCCCAAACAACCTAGTACGGGTTTGTTTGTTGGATTGAACAAGGGTCACGTTGTCACCAAGAAGGAGTTGCCTCCACGCCCCTCAGATCGTAAGGGGGTTGGAAAAGATAAGAGAGCACTCAAGGTTGCAAAGAGAAAGCTTGGAACCCATAAACGCgcaaagaagaagagagaggagATGTCCAATGTTCTCCGGAAGATGAGGGCTGGTGGAGCTGGAGACAAGAAGAAATAA 372 0.457 MRVDPRPNFCLSNKTRSTFLKNPNSTAVSELGFLKPRNSRRDREMAPKQPSTGLFVGLNKGHVVTKKELPPRPSDRKGVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGDKKK 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0571 123 Pfam Ribosomal protein L36e 79 114 IPR000509 GO:0003735|GO:0005840|GO:0006412
Ssu9g0571 123 MobiDBLite consensus disorder prediction 35 123 - -
Ssu9g0571 123 Gene3D 60S ribosomal protein L36 42 78 IPR038097 -
Ssu9g0571 123 PANTHER 60S RIBOSOMAL PROTEIN L36 37 79 IPR000509 GO:0003735|GO:0005840|GO:0006412
Ssu9g0571 123 PANTHER 60S RIBOSOMAL PROTEIN L36-1-RELATED 37 79 - -
Ssu9g0571 123 MobiDBLite consensus disorder prediction 83 99 - -
Ssu9g0571 123 Gene3D 60S ribosomal protein L36 79 121 IPR038097 -
Ssu9g0571 123 MobiDBLite consensus disorder prediction 65 82 - -
Ssu9g0571 123 MobiDBLite consensus disorder prediction 100 123 - -
Ssu9g0571 123 PANTHER 60S RIBOSOMAL PROTEIN L36 79 123 IPR000509 GO:0003735|GO:0005840|GO:0006412
Ssu9g0571 123 PANTHER 60S RIBOSOMAL PROTEIN L36-1-RELATED 79 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0571 Ssu-Chr9 26885224 26887249 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0571 51 123 Cytoplasmic Ribosomal Protein Gene Family AT5G02450 59.615 1.75e-32 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0571 K02920 - gmx:100526979 142.51