Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0567 ATGGCTCCCAAACAACCTAGTACGGGTTTGTTTGTTGGATTGAACAAGGGTCACGTTGTCACCAGGAAGGAGTTGCCTCCACGCCCCTCAGATCGTAAGGGGGTTGGAAAAGATAAGAGAGCACTCAAGGTTGCAAAGAGAAAGCTTGGAACCCATAACGCgcaaagaagaagagagaggagATGTCCAATGTTCTCCGGAAGATGA 207 0.4396 MAPKQPSTGLFVGLNKGHVVTRKELPPRPSDRKGVGKDKRALKVAKRKLGTHNAQRRRERRCPMFSGR 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0567 68 PANTHER 60S RIBOSOMAL PROTEIN L36-1-RELATED 35 60 - -
Ssu9g0567 68 PANTHER 60S RIBOSOMAL PROTEIN L36-1-RELATED 1 35 - -
Ssu9g0567 68 MobiDBLite consensus disorder prediction 1 68 - -
Ssu9g0567 68 MobiDBLite consensus disorder prediction 39 55 - -
Ssu9g0567 68 PANTHER 60S RIBOSOMAL PROTEIN L36 35 60 IPR000509 GO:0003735|GO:0005840|GO:0006412
Ssu9g0567 68 PANTHER 60S RIBOSOMAL PROTEIN L36 1 35 IPR000509 GO:0003735|GO:0005840|GO:0006412
Ssu9g0567 68 Gene3D 60S ribosomal protein L36 32 62 IPR038097 -
Ssu9g0567 68 Gene3D 60S ribosomal protein L36 1 31 IPR038097 -
Ssu9g0567 68 MobiDBLite consensus disorder prediction 21 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0567 Ssu-Chr9 26607884 26609491 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0567 1 65 Cytoplasmic Ribosomal Protein Gene Family AT3G53740 48.454 1.59e-19 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0567 K02920 - cit:102622123 93.2041