Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0561 ATGTACACTTCGAGGAAGAAAATTCACAAGGATAAGGATGCGGAGCCCACTGAATTTGAGGAGACAGTTGCACAGTACTTGTTTGACTTGGAGAACACCAGTCAGGATCTGAAAAGTGACTTGAAAGATCTCTATATAAATCAAGCAATTCAAATGGATGTGGCTGGTAACCGCAAGGCTGTAGTCATCTATGTGCCTTTCAGATTGAGGAAGGGATTCCGCAAGATTCATCTTCGACTTGTCAGAGAGTTGGAGAAGAAGTTTAGTGGGAAGGATGTTGTCTTGATTGCCACAAGGAGGATCTTGCGGCCCCCAAAGAAAGGCTCTGCTGTTCAGCGTCCTCGAACCCGCACCTTGACCGCTGTCCATGATGCCATGCTGGAGGATGTTGTGTATCCTGCAGAGATTGTTGGCAAACGGGTCAGATATCGAATTGATGGGTCAAAAATAATGAAGGTTTTCTTGGACCCCAAGGAGCGCAATAACACTGAGTACAAGCTGGAGACTTTTTCTGGAGTTTACAGGAAGCTTACCGGAAAGGATATAGTATTTGACTATCCAGTCACAGAAGCCTGA 576 0.4549 MYTSRKKIHKDKDAEPTEFEETVAQYLFDLENTSQDLKSDLKDLYINQAIQMDVAGNRKAVVIYVPFRLRKGFRKIHLRLVRELEKKFSGKDVVLIATRRILRPPKKGSAVQRPRTRTLTAVHDAMLEDVVYPAEIVGKRVRYRIDGSKIMKVFLDPKERNNTEYKLETFSGVYRKLTGKDIVFDYPVTEA 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0561 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Ssu9g0561 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Ssu9g0561 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 - -
Ssu9g0561 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0561 Ssu-Chr9 26110875 26111889 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0561 1 191 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 80.628 1.13e-116 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0561 K02993 - gmx:100500684 368.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g0561 9 26110875 26111889 Ssu9g0561 9 26110875 26111889 ECH