Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0518 ATGTTGTTCATGGAGCAGCGACATGACGAAACAAATCGCTACTGTTCTTCATCGGTGCGTTCATCCTGTTCGTGGGAGATGTTTAACAGTGGTTGTGGCATAGGACACGGCGACGATAGATTTCGCGACCAAGGGCCATCCTCTGAAATTGTAGATTTGTTTGGCAGCAAGAAAATGGTGTCTGATCTGAATTCAGGGCTGTCCAAGAAAGCATTTGTTTTTGGATTGAAAGTAAGAGATAAAGAAATCAGAGTTGATCAAGGTTCAGCAAATAATCATCCACAAAATGGTGCTTTTATGAGTGTCAATGACAAATTTGGTGACAGGGAGTCTGAAAAAGTTTTGGTCCAAACAAAGAATGGGGATAATAGTAGCCAATCAGGCTCATTTAATCATTTAGAGAAAGATGCTTATGGCTCTCAATCAGGTGAAGAAAGCGGTGTTAAGAGCATTTCTGCTTACAGAGGACAAGCTGAAAAGGAATTCAGGGTGGAAGTTGAGGCTATTAGTCATGTGCGGCATAAGAACTTGGTTCGACTTTTAGGCTATTGTATTGAAGGCACTCATAGGCTGGCATACTTGCACGAGGCAATTGAGCCAAAAGTTGTGCATCGAGATATTAAGTCGAGCAATATTCTAATTGATGAGGACTTTAATGCCAAAAGACATATGGTCAAGGGTACTGTTTTTGCCACAGATGCTAGTGTAGCTTATGTTGACATCACCGTGAAGACCACAATTTACTTGGCCCTTCAACAGGCGCgcatccacaaaaataaaagtgtggAAGAAGCAGGCATAACTCATTGCTTGAGAGAGGAATTTGTGATCGTTGGTCAAAATGAAGCTGATGATTTGTATGGTAATGTATTTAAGACAAGCATTTTGGGAACTGGTGTGATTGTGTCCACAGACCCGGAAGTGAACAAGGTGATTCTGCAGAACCAGGGGAACATCTTTGTTCCTGCTTATCCAAAATTAGATAGAGAATTAATGGGAGGATACTCTATACGCTAA 1017 0.4051 MLFMEQRHDETNRYCSSSVRSSCSWEMFNSGCGIGHGDDRFRDQGPSSEIVDLFGSKKMVSDLNSGLSKKAFVFGLKVRDKEIRVDQGSANNHPQNGAFMSVNDKFGDRESEKVLVQTKNGDNSSQSGSFNHLEKDAYGSQSGEESGVKSISAYRGQAEKEFRVEVEAISHVRHKNLVRLLGYCIEGTHRLAYLHEAIEPKVVHRDIKSSNILIDEDFNAKRHMVKGTVFATDASVAYVDITVKTTIYLALQQARIHKNKSVEEAGITHCLREEFVIVGQNEADDLYGNVFKTSILGTGVIVSTDPEVNKVILQNQGNIFVPAYPKLDRELMGGYSIR 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0518 338 ProSiteProfiles Protein kinase domain profile. 28 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g0518 338 Gene3D Cytochrome P450 267 338 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g0518 338 SUPERFAMILY Protein kinase-like (PK-like) 137 221 IPR011009 -
Ssu9g0518 338 PANTHER OS01G0323000 PROTEIN 191 222 - -
Ssu9g0518 338 PANTHER OS01G0323000 PROTEIN 156 191 - -
Ssu9g0518 338 PANTHER RECEPTOR-LIKE KINASE PLANT 156 191 - -
Ssu9g0518 338 MobiDBLite consensus disorder prediction 118 136 - -
Ssu9g0518 338 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Ssu9g0518 338 PANTHER RECEPTOR-LIKE KINASE PLANT 191 222 - -
Ssu9g0518 338 PANTHER RECEPTOR-LIKE KINASE PLANT 81 156 - -
Ssu9g0518 338 PANTHER OS01G0323000 PROTEIN 81 156 - -
Ssu9g0518 338 MobiDBLite consensus disorder prediction 118 144 - -
Ssu9g0518 338 Gene3D Phosphorylase Kinase; domain 1 108 191 - -
Ssu9g0518 338 SMART tyrkin_6 78 286 IPR020635 GO:0004713|GO:0006468
Ssu9g0518 338 Gene3D Transferase(Phosphotransferase) domain 1 192 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0518 Ssu-Chr9 24752214 24756636 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0518 141 221 Trihelix Transcription Factor Family AT1G23540 36.667 1.47e-17 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0518 - - gmx:100818864 143.665