Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0513 ATGGCTTCTTCTCGTTCCACTTCCCTACTGGTGCTTCTCTTTGCCATTTTCTCCACTCTTCTATGTTTCTCCCTGGCTTCCAATGAGTTCCAAGTTGGTGGCTCAAAAGGGTGGATTGTCCCACCTGCCAATGACACCAACTTCTACAATGATTGGGCTTCCCGCAACAGGTTCCACGTTGGTGACACCATCCGGTTTAAGTACAAGAAGGACTCTGTGATGGAGGTAGGAGAGGCAGATTACACACACTGCAATGCCACACACCCCACACTCTTCTCCAACAATGGCAACACTGTGTTCAAGCTTGACCACTCAGGGACCTTCTACTTCATCAGTGGGGCATCAGGGCACTGTGAGAAGGGACAGAAGATGATTGTGAGGGTCATGGTGGACGAGTCTCTTCCTCAGCATGCCAAGTCTTCTGGGTACCATGTTCCAGTTTCGCCAATTGGGGTCTCTCAATTGCTCTTCCTTCAGTTTGTTTTGACATGTGTTGCTTCTTATGTAGTTTGA 513 0.4873 MASSRSTSLLVLLFAIFSTLLCFSLASNEFQVGGSKGWIVPPANDTNFYNDWASRNRFHVGDTIRFKYKKDSVMEVGEADYTHCNATHPTLFSNNGNTVFKLDHSGTFYFISGASGHCEKGQKMIVRVMVDESLPQHAKSSGYHVPVSPIGVSQLLFLQFVLTCVASYVV 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0513 170 Gene3D - 26 133 IPR008972 -
Ssu9g0513 170 CDD OsENODL1_like 29 129 IPR041846 -
Ssu9g0513 170 ProSiteProfiles Phytocyanin domain profile. 28 130 IPR003245 GO:0009055
Ssu9g0513 170 SUPERFAMILY Cupredoxins 28 129 IPR008972 -
Ssu9g0513 170 Pfam Plastocyanin-like domain 47 122 IPR003245 GO:0009055
Ssu9g0513 170 PANTHER EARLY NODULIN-LIKE PROTEIN 21 8 134 - -
Ssu9g0513 170 PANTHER BLUE COPPER PROTEIN 8 134 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0513 Ssu-Chr9 24552668 24553619 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0513 11 129 Phytocyanin Superfamily AT1G48940 58.678 2.23e-49 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0513 - - gmx:100815728 315.079