Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0470 ATGTTGTGGTTATTGTTGGAATCAGAGTTGAATGTCGACATAGTTTACGGCGTTGACACGGCCTCGGTGGTAGCGACAGTGAGGCTGGAGCTCTCGCTGCCGGACCTCGAGCGTCTCAAATGCCTCGAGTACTTTGCAACCGCCGCTCTACCGTTACCGACGCGGACTCGGAGCTGTCGTTCACCGTCAAGAAGGACATCACTTAGATCTAATCCTTCTGCGTCGAGATGGACCCCCTTGGCAATTCGTTGTTGCCAAACCTTAGGGCGATCTGTGGAAAAGgcTCACCCGACACAAATCCAAGGAGCGGCTTCAACCGCGCTACCGAGAACCTTCCACAGCCTCAAGCCCCAACTCCTCCTCCCTCCTCCCGACGCTGCCGTCTCCGCCGCCACCTATGCCATCTCCCTCCGCCGCAACTCGCCGTGGCCGGACTCCGTCACCGCCCTCATCGACGCCGCCACCGGTCGCCGCCTCTCCTACGGCGAACTCATCCACCGCGCCGAAACCCTAGCCGCCAACCTCACCTCTGTCCTCAAACTCTCCAAAGGCGACACCGCACTTGTTCTCTCCCCCAACCTCCTCCAGGTTCCGATCCTCTGCTTCGCACTCCTCTCCCTTGGCGTGGTCGTCTCGCCCGCGAACCCTTTATCCACGCGCTCCGAGCTCACGCGCCTCTTCCACGTCAGCAAACCCGCAATCGTGTTCGCAGCAACTTCAGTCGCAGAAAAAACGCGCGAGTTCGGGGTAAAAACAGTGCTCCTGGACTCGCCCGAGTTCGACTCGCTCACGAAGACGAAGGCTCCGAGTGGACTCGGGCCCCCGCGAGAGTGA 834 0.6007 MLWLLLESELNVDIVYGVDTASVVATVRLELSLPDLERLKCLEYFATAALPLPTRTRSCRSPSRRTSLRSNPSASRWTPLAIRCCQTLGRSVEKAHPTQIQGAASTALPRTFHSLKPQLLLPPPDAAVSAATYAISLRRNSPWPDSVTALIDAATGRRLSYGELIHRAETLAANLTSVLKLSKGDTALVLSPNLLQVPILCFALLSLGVVVSPANPLSTRSELTRLFHVSKPAIVFAATSVAEKTREFGVKTVLLDSPEFDSLTKTKAPSGLGPPRE 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0470 277 Pfam AMP-binding enzyme 146 258 IPR000873 -
Ssu9g0470 277 SUPERFAMILY Acetyl-CoA synthetase-like 146 259 - -
Ssu9g0470 277 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 109 266 - -
Ssu9g0470 277 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 109 266 - -
Ssu9g0470 277 Gene3D - 121 276 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0470 Ssu-Chr9 23106384 23109678 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0470 112 260 Monolignol Biosynthesis Gene Families AT5G63380 40.881 1.50e-28 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0470 - K01904 gmx:100784234 249.21