Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0469 ATGGTGAAGGGCGTGATGCTGACGCACCGTAACCTAACGGCGTCAGCCGCGGGATACGACGCCGTTCGCTCGAAGAGAAAGGAGCCCGCGGTGTTTCTCTATACGATGCCGTTTTTCCACGTGTACGGGTTCACGTTCAGCTTGAGGGCGATGGTTCTGTCGGACACGGTGGTGGTCACGGAGAGGTTTAGTCTAAAGGGGATGCTCAGTGCCGTGGAGAGGTTTCGTGTGACGCATCTTGCGGTGGTGCCGCCGCTGATGGTGGCTGTGACGAAGAACAGCGTCACCGACGGGTACGATTTGAGGACGTTGGAAGGGGTCGCGTGCGGTTCGGCTCCGCTGGGAAAGGAAACCGCTGAGGCTTTCAAAGCCAAGTTCCCCAACGTCGTGATCATCCAGGGATACGGTTTAACTGAGTCAACTGCTGGGGTTGTTCGAACCCCTCCAGAGGCCAATCGGGAGGGAACACCAGGTAAACTAATAGCAGGGGTGGAAGCCAAAATTGTGAACCCAAACGCAGGAGAAGCCTTGTTACCTGGTGAGCAAGGAGAACTTTGGCTCAAAGGACCTACCATTATGAAAgGTTATGCTGGTGACCCAGAAGCAACTTCAACAACTTTGGTTGACGGGTGGTTAAGGACCGGGGACCTTTGTTATTTTGATAACGAAGGTTTCTTGTATGTTGTAGACAGGTTAAAAGAGTTGATCAAATATAAGGGCTACCAGGTTGCTCCTGTAGAGCTAGAACAGTTGCTCCTCTCTCACCCAGAGATAAATGACGTCGCAGTTGTTCCATACCCTGATGAAGAAGCCGGCCAGGTGCCCATGGCGTTTGTGGTAAGACAACCCCAAAGTTCCCTTAGTGAGgcagaaataattgattttgtcgCCAAACAGGTTGCACCATACAAGAAAATAAGGCGTGTAGCATTTGTCGATTCCATACCGAAAAATGCTGCGGGAAAGATACTAAGGAAGGACTTAATTAAGCTTGTTCTCTCAAGGTTATAa 1011 0.5005 MVKGVMLTHRNLTASAAGYDAVRSKRKEPAVFLYTMPFFHVYGFTFSLRAMVLSDTVVVTERFSLKGMLSAVERFRVTHLAVVPPLMVAVTKNSVTDGYDLRTLEGVACGSAPLGKETAEAFKAKFPNVVIIQGYGLTESTAGVVRTPPEANREGTPGKLIAGVEAKIVNPNAGEALLPGEQGELWLKGPTIMKGYAGDPEATSTTLVDGWLRTGDLCYFDNEGFLYVVDRLKELIKYKGYQVAPVELEQLLLSHPEINDVAVVPYPDEEAGQVPMAFVVRQPQSSLSEAEIIDFVAKQVAPYKKIRRVAFVDSIPKNAAGKILRKDLIKLVLSRL 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0469 336 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 2 330 - -
Ssu9g0469 336 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 2 330 - -
Ssu9g0469 336 Pfam AMP-binding enzyme C-terminal domain 247 322 IPR025110 -
Ssu9g0469 336 Gene3D - 1 233 IPR042099 -
Ssu9g0469 336 Pfam AMP-binding enzyme 3 238 IPR000873 -
Ssu9g0469 336 Gene3D - 234 334 IPR045851 -
Ssu9g0469 336 SUPERFAMILY Acetyl-CoA synthetase-like 3 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0469 Ssu-Chr9 23099263 23106335 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0469 2 333 Monolignol Biosynthesis Gene Families AT5G63380 56.891 1.23e-138 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0469 - - gmx:100801143 577.4