Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0465 ATGAATGTGAGAACAAGAACATGCTCCTCCGACATAGATCCAAGGAGCGGCTTCAACCGCGCTTCCAGAACCTTCCACAGCCTCAAGCCACCGCTCCTCCTCCCTCCTCCGAAAGCCGCCGTCTCCGCCGCAGCCTACGCCCTCTCCCTCCGCCGCAGCTCGCCGTGGCCGGACTCCGTCACCGTCCTCATCGACGCCGCCACCGGCGACCGCCTCTCCTACGGCGAACTCATCCACCGCGCCGAAACCCTAGCAACCAACCTCACCTCCGTTCTCAAACTCTCCAAAGGCGACACCGCGCTCGTTCTCTCCCCCAACCTCTTCCACGTTCCGATCCTCTACTTCGCGCTCCTCTCCCTCGGCGTGGTCCTCTCGCCCGCGAACCCGCTCTCCACGCGCTCCGAGCTCACGCGCCTCTTCCACGTCAGCAAGCCCGCAATCGTGTTCGCAGTAACTTCGGTCGCAGAAAAAACCCGCGAGTTTGGGGTGAAAACAGTGCTCCTGGACTCGCCCGAGTTCGACTCGCTCACGAAGACGAAGGCTCCGAGTGGACTCGGGTCCCCCGCGCGAGTGACTCAGTCCGACGTGGCAGCGATTCTGTACTCGTCGGGGACCACGGGGATGGTGAAGGGCGTGATGCTGACGCACCGCAACCTAACGGCGTTACTCGCCGGACACGACGCCGTTCGCGCGAAGAGAAAGGAGCCCGCGGTGTTCCTCTGTACGATGCCGTTTTTCCACGTGTACGGGTTCACGTTCAGCTTGAGGGCGATGGTTCTGTCGGACACGGTGGCGATCATGGAGAGGTTTAGTTTGAGGGGGATGCTGAGCGCCGTGGAGAGGTTCCGCGTGACGCACCTCGCGTTGGTGCCGTCGCTAGTGGTGGCTGTGACGAAAGACGCTGTCGCGGACGGGTATGATTTGAGATCGTTGGAAGGAATCGGGTGCGGTGGGGCACCACTAGGAAAGGAAACCGCTGAGGCTTTTAAAGCCAAGTTCCCCAACGTCGTCATCGTCCAGGGATACGGTTTAACTGAGTCTGCCGTTGCCCGAACCACTCCAGAGGATGCTAATCGGGCAGGAACAACAGGTAGACTGGTAGCGGGGATGGAAGCCAAAGTTGTGAACCCAGACACAGGGGAAGCCATGTTTCCTGGTGAACAAGGAGAACTTTGCGTCAAAGGACCTTATGTTATGAAGgGTTATGTTGGTGACCCAGAAGCAACTTCAGCAACTATGGTGGACGGGTGGTTAAGGACTGGGGACCTCTGTTATTTTGATAATGAGGGTTTCTTGTATGTTGTAGACAGGTTAAAAGAGTTGATCAAATATAAAGGCTACCAGGTAAGCTATCGTTATTAA 1362 0.5793 MNVRTRTCSSDIDPRSGFNRASRTFHSLKPPLLLPPPKAAVSAAAYALSLRRSSPWPDSVTVLIDAATGDRLSYGELIHRAETLATNLTSVLKLSKGDTALVLSPNLFHVPILYFALLSLGVVLSPANPLSTRSELTRLFHVSKPAIVFAVTSVAEKTREFGVKTVLLDSPEFDSLTKTKAPSGLGSPARVTQSDVAAILYSSGTTGMVKGVMLTHRNLTALLAGHDAVRAKRKEPAVFLCTMPFFHVYGFTFSLRAMVLSDTVAIMERFSLRGMLSAVERFRVTHLALVPSLVVAVTKDAVADGYDLRSLEGIGCGGAPLGKETAEAFKAKFPNVVIVQGYGLTESAVARTTPEDANRAGTTGRLVAGMEAKVVNPDTGEAMFPGEQGELCVKGPYVMKGYVGDPEATSATMVDGWLRTGDLCYFDNEGFLYVVDRLKELIKYKGYQVSYRY 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0465 453 Gene3D - 37 440 IPR042099 -
Ssu9g0465 453 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 13 450 - -
Ssu9g0465 453 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 13 450 - -
Ssu9g0465 453 Pfam AMP-binding enzyme 61 444 IPR000873 -
Ssu9g0465 453 ProSitePatterns Putative AMP-binding domain signature. 199 210 IPR020845 -
Ssu9g0465 453 SUPERFAMILY Acetyl-CoA synthetase-like 46 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0465 Ssu-Chr9 22958556 22967312 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0465 5 449 Monolignol Biosynthesis Gene Families AT5G63380 47.752 1.67e-139 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0465 - - gmx:100801143 656.751