Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0464 ATGGAGAAGAGAACAAGAATAAGCTCACCGGACACAGACCCAAGGAGCGGCTTCAACCGCGCTTCCAGAACCTTCCACAGCCTCAAGCCCCAACTCCTCCTCCCTCCTCCCGACGCCGCCGTCTCCGCCGCCACCTATGCCATCTCCCTCCGCTGCAACTCGCCGTGGCCGGACTCTGTCACAGCCCTCATCGACGCCGCCACCGGCCACAGCCTCTCCTACGGCGAACTCATCCACCGTGCCGAAAACCTAGCCGCCAACCTCACCTCTGTCCTCAAACTCTCCAAAGGCGACACCGCACTCGTTCTCTCCCCCAACCTCCTCCAGGTTCCGATCCTCTGCTTCGCACTCCTCTCCCTCGGTGTGGTCGTCTCGCCCGCGAACCCTTTATCCACGCGCTCCGAGCTCACGCGCCTCTTCCACGTCAGCAAACCCGCAATCGTGTTCGCAGCAACTTCAGTCGCAGAAAAAACGCGCGAGTTCGGGGTAAAAACAGTGCTCCTGGACTCGCCCGAGTTCGACTCGCTCACGAAGACGAAGGCTCCGAGTGGACTCGGGGCCCCCGCGAGAGTGACTCAGTCCGATGTGGCAGCGATTCTGTACTCGTCGGGGACCACGGGGATGGTGAAGGGCGTGATGCTGACGCACCGTAACCTAACGGCGTCAGCCGCGGGATACGACGCCGTTCGCTCGAAGAGAAAGGAGCCCGCGGTGTTCCTCTATACGATGCCGTTTTTCCACGTGTACGGGTTCACGTTCAGCTTGAGGGCGATGGTTCTGTCGGACACGGTGGTGGTCACGGAGAGGTTTAGTCTAAAGGGGATGCTCAGCGCCGTGGATAGGTTTCGTGTGACGCATCTTGCGGTGGTGCCGCCGCTGATGGTGGCTGTGACGAAGAACAGCGTCACCGACGGGTACGATTTGAGGACGTTGGAAGGGGTCGCGTGCGGTTCGGCTCCGCTGGGAAAGGAAACCGCTGAGGCTTTCAAAGCCAAGTTCCCCAACGTCGTGATCATCCAGGGATACGGTTTAACTGAGTCAACTGCTGGGGTTGTCCGAACCCCTCCAGAGGCCAATCGGGAGGGAACACCAGGTAAACTAATAGCAGGGGTGGAAGCCAAAATTGTGAACCCAAACGCAGGAGAAGCCTTGTTACCTAGTGAGCAAGGAGAACTTTGGGTCAAAGGACCTACCATTATGAAAgGTTATGCTGGTGACCCAGAAGCAACTTCAACAACTTTGGTTGACGGGTGGTTAAGGACCGGGGACCTTTGTTATTTTGATAACGAAGGTTTCTTGTATGTTGTAGACAGGTTAAAAGAGTTGATCAAATATAAGGGCTACCAGGTTGCTCCTGTAGAGCTAGAACAGTTGCTCCACTCTCACCCAGAGATAAATGACGTCGCAGTTGTTCCATACCCTGATGAAGAAGCCGGCCAGGTGCCCATGGCGTTTGTGGTAAGACAACCCCAAAGTTCCCTTAGTGAGgcagaaataattgattttgtcgCCAAACAGGTTGCACCATACAAGAAAATAAGGCGTGTAGCATTTGTCGATTCCATACCGAAAAATGCTGCGGGAAAGATACTAAGGAAGGACTTAATTAAGCTTGTTCTCTCAAGGTTATAa 1632 0.5478 MEKRTRISSPDTDPRSGFNRASRTFHSLKPQLLLPPPDAAVSAATYAISLRCNSPWPDSVTALIDAATGHSLSYGELIHRAENLAANLTSVLKLSKGDTALVLSPNLLQVPILCFALLSLGVVVSPANPLSTRSELTRLFHVSKPAIVFAATSVAEKTREFGVKTVLLDSPEFDSLTKTKAPSGLGAPARVTQSDVAAILYSSGTTGMVKGVMLTHRNLTASAAGYDAVRSKRKEPAVFLYTMPFFHVYGFTFSLRAMVLSDTVVVTERFSLKGMLSAVDRFRVTHLAVVPPLMVAVTKNSVTDGYDLRTLEGVACGSAPLGKETAEAFKAKFPNVVIIQGYGLTESTAGVVRTPPEANREGTPGKLIAGVEAKIVNPNAGEALLPSEQGELWVKGPTIMKGYAGDPEATSTTLVDGWLRTGDLCYFDNEGFLYVVDRLKELIKYKGYQVAPVELEQLLHSHPEINDVAVVPYPDEEAGQVPMAFVVRQPQSSLSEAEIIDFVAKQVAPYKKIRRVAFVDSIPKNAAGKILRKDLIKLVLSRL 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0464 543 Gene3D - 39 440 IPR042099 -
Ssu9g0464 543 Pfam AMP-binding enzyme 60 445 IPR000873 -
Ssu9g0464 543 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 13 537 - -
Ssu9g0464 543 MobiDBLite consensus disorder prediction 1 20 - -
Ssu9g0464 543 Pfam AMP-binding enzyme C-terminal domain 454 529 IPR025110 -
Ssu9g0464 543 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 13 537 - -
Ssu9g0464 543 ProSitePatterns Putative AMP-binding domain signature. 199 210 IPR020845 -
Ssu9g0464 543 SUPERFAMILY Acetyl-CoA synthetase-like 60 541 - -
Ssu9g0464 543 CDD 4CL 52 535 - -
Ssu9g0464 543 Gene3D - 441 541 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0464 Ssu-Chr9 22895078 22902773 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0464 13 540 Monolignol Biosynthesis Gene Families AT5G63380 50.912 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0464 - - gmx:100801143 858.211