Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0422 ATGGGATCTCAAGGTGGGGCAATGCAAGAGCCAAAGACTACTACCCCTTTGGCTAGGCAAGGGTCCTTGTATAATCTGACCCTTGATGAGGTGCAGAACCAGCTTGGGAATTTGGGGAAGCCACTTGGCAGCATGAATCTTGATGAGCTGCTGCATAGTGTGTGGAGTGCTGAAGCTGGTGGTGAGGCCTCTGGTTTGGACTTTGGTGGTGATGCTAACATGCAGCAGCATGGCCAGGTTGCTTCTGGCTCCTCTCTGAATTCACAGGGGAGCCTAACTTTGTCTAGGGATTTAGCAAGAAAACTGTTCATGAGGTTTGGAGAGATACGCAACTGA 336 0.503 MGSQGGAMQEPKTTTPLARQGSLYNLTLDEVQNQLGNLGKPLGSMNLDELLHSVWSAEAGGEASGLDFGGDANMQQHGQVASGSSLNSQGSLTLSRDLARKLFMRFGEIRN 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0422 111 MobiDBLite consensus disorder prediction 66 90 - -
Ssu9g0422 111 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 102 IPR043452 GO:0003700|GO:0045893
Ssu9g0422 111 MobiDBLite consensus disorder prediction 75 90 - -
Ssu9g0422 111 PANTHER BZIP TRANSCRIPTION FACTOR 2 102 - -
Ssu9g0422 111 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0422 Ssu-Chr9 21309913 21310248 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0422 1 103 bZIP Transcription Factor Family AT3G56850 51.456 3.08e-21 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0422 K14432 - gmx:100170741 163.696