Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0400 ATGGCACAGAAGCAGAAGCAGCAACGCCCGTTCCCAATTGACGATCCACCCACCGCTTCCTCTTCCGAATACGAGGAAGATGAAGACCAACAACCTTCCTCCCAACAACGCAAAGAAGAAGTTTCCtctgaagaagaagaggaagaagttTCCTCCCAAGAAGACCACGACGACCAACCTTCCTCCCTTCCTCCCGCTGCTACAAACCCCCGCCCCAAACCGTCCTCGTCCGAATCCGACACCGACACCGACTCCGAACCCGAACCCACCAAAGTAAAACCAAAGCCCGTGGATCCGGCCCAAAAGCCTAAGCCCCAGCCCACCCCCGCGCCGCCCAGATCGGGATCCAAGCGCGTCGCCGAGAACAACGTCCAACCCAAACGCGCGAAGAAGAAACCGACAGACGCTTCTTCTTCCGCTGCCGCCGCCGTTGCTTCCGACGAAGAGACGGAGGAGGACGGGAAGAAGTCCGGCGGCCACACGAAGCTGTTCCAGAGGCTCTGGAGCGAGGAAGACGAACTCGCCATTCTGAAGGGTATGGCCGAGTTCACTTCAAAGACGGGGCAAGACCCTTATAAGTACGCTGACTCCTTCCACGATTTCGTTAAGAAGTCGCTCCACGTGGAAGCTTCGAGCAACCAGCTCAAGGAGAAGATCCGTAGGCTGAAGAAGAAGTTCGAGACCAATGCCGGGAGAGGGAAGAACGGGGAGGGTCCTAGGTTGTACAAACCGCATGACCAGACAGTGTTCGAATTGTCGAAAAGGTTTGGGGAGGAGCTAATGGGCCGGTGGAAAAGACCAAGCCTACTGGGAAAGCTGCCAAGACTCCAAAGAAGGAAGCTACTAGCAGGAATGTGGCAAAACCTGAATCGAAACCGCAAACGGAGCCGGTGGAGTTTAAAGAGTCTGAAAAGCATGATCGTGGTGATGTAA 933 0.5434 MAQKQKQQRPFPIDDPPTASSSEYEEDEDQQPSSQQRKEEVSSEEEEEEVSSQEDHDDQPSSLPPAATNPRPKPSSSESDTDTDSEPEPTKVKPKPVDPAQKPKPQPTPAPPRSGSKRVAENNVQPKRAKKKPTDASSSAAAAVASDEETEEDGKKSGGHTKLFQRLWSEEDELAILKGMAEFTSKTGQDPYKYADSFHDFVKKSLHVEASSNQLKEKIRRLKKKFETNAGRGKNGEGPRLYKPHDQTVFELSKRFGEELMGRWKRPSLLGKLPRLQRRKLLAGMWQNLNRNRKRSRWSLKSLKSMIVVM 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0400 310 MobiDBLite consensus disorder prediction 77 98 - -
Ssu9g0400 310 PANTHER BNAANNG10740D PROTEIN-RELATED 13 256 IPR007592 GO:0006355
Ssu9g0400 310 PANTHER STOREKEEPER PROTEIN-LIKE 13 256 - -
Ssu9g0400 310 MobiDBLite consensus disorder prediction 148 162 - -
Ssu9g0400 310 Pfam Protein of unknown function, DUF573 164 255 IPR007592 GO:0006355
Ssu9g0400 310 MobiDBLite consensus disorder prediction 1 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0400 Ssu-Chr9 20414035 20414967 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0400 12 254 GeBP Transcription Factor Family AT1G61730 36.059 1.32e-29 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Ssu9g0400 DUF573 2.9e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0400 - - gmx:100791520 256.914