Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0392 ATGAAGATCACCATCCTAATCTGTTTTAGTGTTCTTCCATTTGCATTTGCTAACCTTCGCCTTGGCTATTATAACTGTAGCTGCCCAATGGCAGAGATCATTGTACACGACGTCGTACAGAGGAATTTTGAGCACGACGTTTCAATTGTCGCGGCCTTGCTTCGCATGCACTTCCATGATTGCTTTGTCAAGGGTTGCGACGCCTCTATACTAATAGATCCAACCAACGAAACATCATCAGAGAAGAATGCAGAACCAAACCGAACAGTTCGTGGATATGAGATCATCGACGAGGCCAAGAGACTTTTGGAAAAAGTTTGCCCTTCAACCGTTTCATGTGCGGATATCATAGCCCTTGCCACTAGAGATGCAGTGGCTCTAGCAGGGGGACCCATATACTTTGTCCCCACAGGAAGAAAAGATGGATTTATTTCAAGCAAATTTGAAGTGCACCTTCCAGGCCCATATCTTAATGCGTCTCAGGCTCTCCAATTTTTCACCGCAAAGAACATGACACTCTATGAAATGGTGACCCTTTTGGGAGCACACACCCTTGGTTCTGCTCACTGTAGTTCCTTTAAAAACAGGCTCTCTAGCTTTGTCGGACACCTTGATCCCACAATGGACCCTGATTTGGATGCAATTTTGGTGCGGTTATGTGGGTCGTCGTCTGCGCCACAAAAGGATGATCCCACTGTGGTTTTGGAAACCACACCTTCTATATTTGACAACAATTTTACGGCCAATTGTTTCTGA 756 0.4524 MKITILICFSVLPFAFANLRLGYYNCSCPMAEIIVHDVVQRNFEHDVSIVAALLRMHFHDCFVKGCDASILIDPTNETSSEKNAEPNRTVRGYEIIDEAKRLLEKVCPSTVSCADIIALATRDAVALAGGPIYFVPTGRKDGFISSKFEVHLPGPYLNASQALQFFTAKNMTLYEMVTLLGAHTLGSAHCSSFKNRLSSFVGHLDPTMDPDLDAILVRLCGSSSAPQKDDPTVVLETTPSIFDNNFTANCF 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0392 251 SUPERFAMILY Heme-dependent peroxidases 18 246 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu9g0392 251 Gene3D Peroxidase, domain 2 153 249 - -
Ssu9g0392 251 ProSitePatterns Peroxidases active site signature. 50 61 IPR019794 GO:0004601
Ssu9g0392 251 PRINTS Haem peroxidase superfamily signature 50 64 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g0392 251 PRINTS Haem peroxidase superfamily signature 235 250 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g0392 251 PRINTS Haem peroxidase superfamily signature 111 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g0392 251 PRINTS Haem peroxidase superfamily signature 175 190 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g0392 251 PRINTS Haem peroxidase superfamily signature 129 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g0392 251 PRINTS Plant peroxidase signature 28 47 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g0392 251 PRINTS Plant peroxidase signature 129 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g0392 251 PRINTS Plant peroxidase signature 110 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g0392 251 PRINTS Plant peroxidase signature 174 186 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g0392 251 PRINTS Plant peroxidase signature 233 248 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g0392 251 PRINTS Plant peroxidase signature 91 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g0392 251 PRINTS Plant peroxidase signature 52 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g0392 251 PANTHER PEROXIDASE 25-RELATED 12 228 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g0392 251 PANTHER PEROXIDASE 12 228 - -
Ssu9g0392 251 Gene3D - 22 152 - -
Ssu9g0392 251 Pfam Peroxidase 36 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g0392 251 CDD secretory_peroxidase 18 246 IPR033905 GO:0004601|GO:0042744
Ssu9g0392 251 ProSitePatterns Peroxidases proximal heme-ligand signature. 175 185 IPR019793 -
Ssu9g0392 251 ProSiteProfiles Plant heme peroxidase family profile. 18 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0392 Ssu-Chr9 19625100 19627950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0392 4 246 Peroxidase AT5G17820 51.429 4.16e-84 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0392 K00430 - gmx:100816459 309.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1707 4 30072092 30074110 Ssu9g0392 9 19625100 19627950 PCT