Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0387 ATGGCACCTTTCATCTATAACACCAAACCTCAACCAAAAAAACTCATTCTTCTCCTCAACATATCCTTCATTTTCCTCATCTTTCTCTTCCTCCAAGCCTATCTCCACACTTCTGGTTCTAATGTTGATGCCTCCACAAAAATCTTCAACCATTCTAGAATGCTCAGTGACATCAGTGTTGATGGTTGCACTGACCTTCACAAGTACTCAGATTATGACTCCAAGTGCTTATATGTCAAATCTCATGTTCACTGCAGGTCAAAAGGGTATATAAACTATCTCCAAATCTTTTATTGTAGCTTTGGCCATTCCCCAATTTTGGGCCATGCATTACTTGTACTGTGGCTTGTGGTGTTGTTCTATCTTTTAGGTGACACAGCTTCAAATTACTTTTGCACTAACCTAGAAGGTTTGTCTGACATCTTGAGACTCTCCCCCACCATAGCTGGGGTAACCCTGCTTTCTCTAGGAAATGGTGCTCCTGATTTTTTTGCTAGTGTTGTTTCCTTCACAAGATCCAATAATGGTGCAGTTGGCCTCAATAGCATTCTGGGAGGGGCATTTTTTGTCTCCAGTGCTGTTTTGGGGATCATAAGTTTCCTTGTTAGTGCAAATGAAATTGCAATTGACAAAGCCAGTTTCATTAGAGatgtcattttctttcttttctctcttttcattctCCTTGTCATCATTTCTATTGGTAAAATTAGCTTGTTGGGGTCAATTTGTTATGTTTCTATTTACTTCCTTTATGTTTGTGCTGTCTCTGCCACACATTTCATTTATGGAGGGGACGAGACAAAAGGTGAACTTGCCTCATCTTCTGATGACTTGGCAGAGTCTGGCATACCCTTGCTAGGTTGTGTTGATGATGAGAAACCACATGTATCAAATAAAGAGGTTATTGAAGATAAGAGGGACAAGCAAGAGGGTTTAGGAAATGATTCATTTGACTTTACTTACTTGAGCAAGTTTCTACAAGTACTAGAATTACCTCTTTGCTTGCCAAGAAAGCTTACTATTCCAGTTGTGAGTGAGGATGGATGGTCAAAGCCATATGCTGTTATATCTGTCACATTAGCACCAGTTTTGTTTGCAGCTCTTTGTAACACCCAAATGGAAAATGTGAGTTCAAGGAGTAGTCTTGTTGCATACTTGACAGCTGCTTTAATTGGCATTATTTTCGGGAACATGGCATGTGTGACCACCAAGAGCACTAGTCCACCTAGAAAGTGCTTGTTTCCTTGGCTAGCTGGGGGCTTTTCCATGAGTGTAACATGGACTTACATCATCGCTGAGGAACTAGTATCCCTCTTGGTTGCACTTGGGAATGTCATAGGGGTTAGTCCTTCGATCCTTGGACTAACTGTCCTAGCTTGGGGTAATTCTCTAGGGGATTTGATAGCTAATGGTGCAATGGCCAAGAATGGTGGAGCTGATGGGGCCCAAATAGCTGTCTCTGGTTGTTATGCAGGTCCTATGTTTAACATTTTGATGGGCTTGGGTTTGCCTCTTGTTCTCTCAGCATGGTCTGAGTACCCAGAGTCTTACGTCATTCCCAACGACCCTTCTCTTTATGGTACGCTTTTATTCTTGATGGGAGGGGTGCTTTGGGCCCTAGTGATATTGCCAAAAAAGAATATGAAGCTTGATAGGTCCTTGGGAGCTGGGCTCTTGACCATTTACCTTTGCTTTTTGTTTATAAGGATGGCCATGGCAATTGGTGTTATTAAATTCTAG 1743 0.4108 MAPFIYNTKPQPKKLILLLNISFIFLIFLFLQAYLHTSGSNVDASTKIFNHSRMLSDISVDGCTDLHKYSDYDSKCLYVKSHVHCRSKGYINYLQIFYCSFGHSPILGHALLVLWLVVLFYLLGDTASNYFCTNLEGLSDILRLSPTIAGVTLLSLGNGAPDFFASVVSFTRSNNGAVGLNSILGGAFFVSSAVLGIISFLVSANEIAIDKASFIRDVIFFLFSLFILLVIISIGKISLLGSICYVSIYFLYVCAVSATHFIYGGDETKGELASSSDDLAESGIPLLGCVDDEKPHVSNKEVIEDKRDKQEGLGNDSFDFTYLSKFLQVLELPLCLPRKLTIPVVSEDGWSKPYAVISVTLAPVLFAALCNTQMENVSSRSSLVAYLTAALIGIIFGNMACVTTKSTSPPRKCLFPWLAGGFSMSVTWTYIIAEELVSLLVALGNVIGVSPSILGLTVLAWGNSLGDLIANGAMAKNGGADGAQIAVSGCYAGPMFNILMGLGLPLVLSAWSEYPESYVIPNDPSLYGTLLFLMGGVLWALVILPKKNMKLDRSLGAGLLTIYLCFLFIRMAMAIGVIKF 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0387 580 Pfam Sodium/calcium exchanger protein 113 255 IPR004837 GO:0016021|GO:0055085
Ssu9g0387 580 Pfam Sodium/calcium exchanger protein 418 570 IPR004837 GO:0016021|GO:0055085
Ssu9g0387 580 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 6 580 - -
Ssu9g0387 580 PANTHER CATION/CALCIUM EXCHANGER 1 6 580 - -
Ssu9g0387 580 Gene3D - 354 573 IPR044880 -
Ssu9g0387 580 Gene3D - 144 273 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0387 Ssu-Chr9 19259726 19261468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0387 61 578 Antiporters AT5G17860 52.952 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0387 K13754 - gmx:100818583 970.689