Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0370 ATGGAAAATAGGCTCCATCCTTCATTGCTTCTTGTTTTGGTAACAGTTTTACTTTCAATCTTTTATTCAGAGCAACTGCAATCCTCTCACTCTCAGACCCTTCTAAGAATTCAACAGCTATTGAACTTTCCAGCTGTTTTAAGCAGCTGGAACAACAACACAGACTTTTGCAGCACAGATTCAACATCTTCCCTTACTGTTGTGTGCTATGAGGGCACCATAACCCAGTTGCACATAGTTGGTGAAACAAGAGCTCTACTTCTCCCTCGAAATTTCTCAATAGATTCCTTTGTCACAACACTGGTTAGGCTTCCTAGTTTGAAAGTCCTCACTTTGGTTTCTCTTGGCATATGGGGTCCATTACCTGGTAAGATTGCGCGATTGTCATTACTGGAAATAGTTAATGTGAGTTCAAATTTTCTATATGGTTCCATCCCTCCAGAGTTCTCATTACTGTCACATCTCCAAACACTCATTCTAGATGACAACATGTTTTCTGGCCACCTTCCTGAATGGTTGGATTCCTTTCCAGCCTTGACTGTGTTAAGTTTGAAAAGCAATTTGTTCAATGGCTCGCTTCCGGATTCGCTAAGTAGCTTGGAGAATATGAGAATTGTTTCACTTTCGCATAACCATTTTTATGGACCAGTGCCTGACTTGCGCCGTTTGACAAATCTTCAAGTGCTGGAATTGGATGATAATGCTTTTGGACCTCGGTTTCCCCAGCTTGGTGACAAATTGGTTACTCTAGTACTAAGAAACAATAAGTTCAGGTCTAGTATCCCTAATGACGTGAGCACATATTATCAACTTGAGAGACTTGACTTCTCAGCAAATACATTTGTTGGGCCATTCCAACTAGCACTGTTATCACTTCCTTCTATTACTTATCTGAACATTTCTGGGAACAAATTAACAGGAATGCTTTTTGAGAATCTATCTTGCAATCCTGGACTTGAAGCAGTGGATTTATCCTCAAATCTTTTGACTGGGAACTTACCAAAATGTTTAATGTCAAATTCCAAATATAGGACTGTCTTGTATGCTAGAAATTGTCTAGAAGAGACAAATCAAAATCAGCATGCTCAGCCCTTTTGCCACACTGAAGCCATAGCTGTGGGAATACTACCTGAGGGAAAGAAGCACAAACGAGTATCTAAGGCTGTTCTCTCCCTTGGGATAGTATGTGGAACTTTTGGAGGAGTAGCAATTGTTGCACtgcttttctttattattagaaGGGTAAATGTCAAAAGCAAAATCAAGAATCCTCCAACAAAATTATTATCAGAGAATGCAGCTTCTGGATACACCTCTAAGTTACTCTCTGATGCAAGGTATATATCTCAAACAATGAAGTTCGGAACAGTTGGCCTGCCTCCTTATCGAGCTTTCTCACTGGAAGAGATTGTAGCAGCTACAAACAACTTTGACACATCTTCTTTTATGGGTGAAGGTTCTCAGGGAAAGATGCACAGAGGTCAACTAAAGGATGGTTTACTTGTTGCCATTAGAAGTGTAAAAATGACCAAAAGCTATAGCACTCAAGATTTTATGCATAACATTGAGCTCATATCAAAATACAGGCATCGCCATTTAGTCAGTGTTCTTGGACACTGCTTTGAATGTTATTTGGATGATTCAAGTGTCAGCAGCATATTTATTGTCTTTGAGTATGTACCAAATGGCACGCTCAAGGGCTGGATCTCAGATGGGCACTATAGAAAATCCCTGACTTGGATGCATCGCATAGAAGCCGCAATTGGAGTAGCAAAGGGCATCCAATTTTTGCATACAGGGATTGTCCCTGGTGTATATTCAAACAATCCCAAAATAACAGATGTTTTACTTGACCAAAATTTTGTTGCAAAAATCAGCAGTTATGACCTACCTTTGTTATCTAACATGGGAAAGGTTGGGCAAGGTAATCCTTCCAGCGGATTCAGAAGTCCTAGCTTTAACAAAAGTGTAAAACATGAAGAGAAGTCTGATGTATATGACTTTGGAGTAATAATACTGGAACTAATTCTAGGAAGGACAATAAAGTCAAGGAATGTGGACACTTTAAAAGATCTGTTGCATGCAAGCATAACAGCTGATGGTGAAGCTAGGAGGAACATTATAGATCCAGCAGTTTGCAAGGCATGCTTGGATCAATCATTGAAGACAATGATGGAGATTTGTGTGAGGTGCCTAGTCAAAGAGCCAGCAGAGAGGCCCTCTATAGAGGATGTTTTGTGGAATTTGCAGTTTGCTGCTCAAGTCCAAGATGCATGGAGAGGGGACTCTCAAAGTAGTAGCAGCGATGGCTCTCCCATCTCACCTTTAGCATCCCGACGAATGACCTTCCATTAG 2355 0.4025 MENRLHPSLLLVLVTVLLSIFYSEQLQSSHSQTLLRIQQLLNFPAVLSSWNNNTDFCSTDSTSSLTVVCYEGTITQLHIVGETRALLLPRNFSIDSFVTTLVRLPSLKVLTLVSLGIWGPLPGKIARLSLLEIVNVSSNFLYGSIPPEFSLLSHLQTLILDDNMFSGHLPEWLDSFPALTVLSLKSNLFNGSLPDSLSSLENMRIVSLSHNHFYGPVPDLRRLTNLQVLELDDNAFGPRFPQLGDKLVTLVLRNNKFRSSIPNDVSTYYQLERLDFSANTFVGPFQLALLSLPSITYLNISGNKLTGMLFENLSCNPGLEAVDLSSNLLTGNLPKCLMSNSKYRTVLYARNCLEETNQNQHAQPFCHTEAIAVGILPEGKKHKRVSKAVLSLGIVCGTFGGVAIVALLFFIIRRVNVKSKIKNPPTKLLSENAASGYTSKLLSDARYISQTMKFGTVGLPPYRAFSLEEIVAATNNFDTSSFMGEGSQGKMHRGQLKDGLLVAIRSVKMTKSYSTQDFMHNIELISKYRHRHLVSVLGHCFECYLDDSSVSSIFIVFEYVPNGTLKGWISDGHYRKSLTWMHRIEAAIGVAKGIQFLHTGIVPGVYSNNPKITDVLLDQNFVAKISSYDLPLLSNMGKVGQGNPSSGFRSPSFNKSVKHEEKSDVYDFGVIILELILGRTIKSRNVDTLKDLLHASITADGEARRNIIDPAVCKACLDQSLKTMMEICVRCLVKEPAERPSIEDVLWNLQFAAQVQDAWRGDSQSSSSDGSPISPLASRRMTFH 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0370 784 Gene3D Ribonuclease Inhibitor 29 147 IPR032675 -
Ssu9g0370 784 Gene3D Ribonuclease Inhibitor 148 243 IPR032675 -
Ssu9g0370 784 SUPERFAMILY Protein kinase-like (PK-like) 457 751 IPR011009 -
Ssu9g0370 784 Pfam Leucine rich repeat 153 213 IPR001611 GO:0005515
Ssu9g0370 784 Gene3D Ribonuclease Inhibitor 244 373 IPR032675 -
Ssu9g0370 784 SUPERFAMILY L domain-like 78 353 - -
Ssu9g0370 784 MobiDBLite consensus disorder prediction 760 784 - -
Ssu9g0370 784 Gene3D Phosphorylase Kinase; domain 1 441 559 - -
Ssu9g0370 784 MobiDBLite consensus disorder prediction 760 775 - -
Ssu9g0370 784 Pfam Protein tyrosine and serine/threonine kinase 481 746 IPR001245 GO:0004672|GO:0006468
Ssu9g0370 784 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 6 771 - -
Ssu9g0370 784 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 6 771 - -
Ssu9g0370 784 Gene3D Transferase(Phosphotransferase) domain 1 560 768 - -
Ssu9g0370 784 ProSiteProfiles Protein kinase domain profile. 477 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0370 Ssu-Chr9 18225403 18230633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0370 43 778 Miscellaneous Gene Families AT3G03770 62.838 0.0 900
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Ssu9g0370 PK_Tyr_Ser-Thr 2.2e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0370 - - gmx:100813207 1381.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g0370 9 18225403 18230633 Ssu9g0370 9 18225403 18230633 ECH