Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0348 ATGGATTCTGTTTATTGTTGtttgagttttgatgattttgaaGATTATGTAAATCCAAATAGTCCTGTATATAGGAACTATGTGTGTCTTAGTTGCTTGATACTAAACCTTTTGAGTGTGTGGGGGTTCCTTTTATCAATATTGTCATCTGGATTTGGATTCAACCATGGGCATAGTCACTGGAAATGGGGTCATTTGGTGGTGTTTGGTGCTGTTCAAAGCACAGCAACAGGGATTTTGCACGCTTTTGAAATGCTCTTGGTGTTGGACTGTGCTCCCTCAGGGAAAGAAGGtgtattttatatttggtaTGGTTGGATGAGAGCTGCTGGGTTGTGCGTGGGGTTCACGGTGGGGTCGGTCGTGCTGGGACTCATTAGAGCGTCGTTTCGAGCTACATTTTGCATTGCCATTGCTGGAATTGTGGTTCTGCTTTTCAGAAACATTAGTGATGTTGGTGGTGCTGTTGCTGCAGAGCACATTAATGTAAGGAGAAGTTCGGATGTCCCTGGCTTGGATTCTAAAGAATCTGCCTGCATTTGA 543 0.4162 MDSVYCCLSFDDFEDYVNPNSPVYRNYVCLSCLILNLLSVWGFLLSILSSGFGFNHGHSHWKWGHLVVFGAVQSTATGILHAFEMLLVLDCAPSGKEGVFYIWYGWMRAAGLCVGFTVGSVVLGLIRASFRATFCIAIAGIVVLLFRNISDVGGAVAAEHINVRRSSDVPGLDSKESACI 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0348 180 PANTHER OS06G0113900 PROTEIN 39 177 - -
Ssu9g0348 180 SUPERFAMILY MFS general substrate transporter 37 145 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0348 Ssu-Chr9 17376439 17378766 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0348 6 46 C3H Transcription Factor Family AT5G38895 41.463 6.50e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0348 - - gmx:100812276 219.164