Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0334 ATGGCTACCAACACATTGATGAGTTCTGCTGTATCGGCCTTCCCATCTCTCCTTTCTTCCTCAAAATCCAGATTTGCCACTGCACTTCCACTTTCCAGCTTTGGTTCCAATGCCTCTGCTCGCTTTACCATGACCGCTGACTGGATGCCAGGCCAGCCTAGACCCCCTTACCTTGATGGTTCAGCACCTGGTGACTTTGGATTCGACCCTCTTCGTCTTGGTGAAGTACCAGAGAATCTTGAGAGGTTCAAAGAGTCAGAACTCATTCACTGCAGATGGGCCATGCTTGCAGTTCCAGGAATTTTGGTACCAGAGGCATTGGGCTTAGGCAACTGGGTAAAGGCTCAGGAATGGGCCGCAGTTCCTGGGGGCCAAGCAACCTACTTAGGCAACCCTGTTCCATGGGGCACCCTACCCACCATTCTGGTCATTGAATTCCTTGCTATTTCCTTTGTGGAGCACCAAAGGAGCATGGAGAAAGACCCAGAGAAGAAGAAATACCCTGGTGGTGCTTTTGATCCTTTGGGATACTCTAAGGACCCTAAAACATTCCACGAATACAAAGTCAAAGAAATTAAGAATGGACGTCTTGCCCTGTTGGCTTTTGTGGGATTCTGTGTTCAACAATCAGCCTACCCCGGCACTGGACCCTTGGAGAACTTGGCTGCTCACTTGGCTGATCCATGGCACAACAACATTGGAAATATCATTATTCCCCAATCGATTTCGCCTTGA 735 0.4912 MATNTLMSSAVSAFPSLLSSSKSRFATALPLSSFGSNASARFTMTADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGGQATYLGNPVPWGTLPTILVIEFLAISFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKTFHEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLAAHLADPWHNNIGNIIIPQSISP 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0334 244 SUPERFAMILY Chlorophyll a-b binding protein 38 238 - -
Ssu9g0334 244 Pfam Chlorophyll A-B binding protein 55 209 IPR022796 -
Ssu9g0334 244 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 23 234 IPR001344 GO:0009765|GO:0016020
Ssu9g0334 244 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTIC 23 234 - -
Ssu9g0334 244 Gene3D Chlorophyll a/b binding protein domain 49 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0334 Ssu-Chr9 16553761 16555662 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0334 1 196 Chloroplast and Mitochondria Gene Families AT3G54890 80.303 6.77e-107 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0334 K08907 - gmx:100305992 465.307