Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0330 ATGGAGAAGAACCTTGCCGAGACTTCTGGCAGTTTCGCTCACAGAGCCGAGGATGCCGCCAGCGACACTACTCATTCCCCGGCGCCGGAGCCCGCAGATAAAGTCGATGCCAAACCGGACGCCGGCGAAACTGAAAAACCTGCGGATCCAGATGACGTTCAGGGAGAGCAAGAACTCACagaggagaagaaagaagaagaagaagaagaaaccgTGGAGGCTCCACCGGAATCTCCTCCTCCGAGCCTCGAGAAGGTTTCAGAAGACATTGACCAATTCCTCGTGACTCTCCAGAGCAACAAGAACGCAAATAATAAGAATGAAGCCACCGCATTGGAGGTCCCTAAATCCATTCACACTTTCTTGGATCTCGTGGAGCAGAAGATCAAAAAGCACGACAGCGGCGAGGCCAAATGGGGGGAGAGAGCGGAAGAGGATTCGTTGTTTCTGGAATCCGTGAATCGCGTTTCAAAGCTGATGAACCATTTCACGGAGCACGCTCAATCTCAACGCTCGGAAGAACAAGAGGACAAGGACAGGGTCAAGGGCGAAACGGACTTTCTGATCAACGGCCTCGGCGCGATTCAGCAGCGTGCGATGTCGTTTTTGGAGGAGGAGTTCCGTTCACTGATGGAAGAATCCAGAAACCAGAACAAACCAGACCCGAAATGGAAGCAACCCGTGGCGGAAGCCTCGGAGTCCGAGCCACCCGCGGAGGCGGTTATGGATTTCCCGGGTTTCGCGGAGGAAACGGTCGCCAATCTGAGCAAAATAGCCAAAGAAATGATACTGGGCGGTTACGAGAACGAGTGCTGCCAGGTTTACGCGGTTTCGCGGAGGCACGCGTTCGAGGAGGGCTTGCACAAGCTGCTAGGGTACGAGAAACTCAGCGTCGACGAGGTGCAGAAAATGCAGTGGGAACCACTGGAGCGCGAGATCCCCACGTGGATCAACGCGTGGAAGGAATGCGCTGCCGTGTGGTTCCCCGGCGAGTGGAGGCTCGCCGAGTCGGTGTTCGCCGACAAGGCGGACACCGGGGCGAGCCTCTATGGCGACCTCTCCCGCAGAATTGCAGTTCAGCTCTTCAATTTCGTGGAGAGTGTTGCCATGACGAAGCGCGCCGGGGAGAAACTCTTCAAATTCCTCGACATGTACGAGACCTTACGGGACGTCATTCCCAACATGGAGAACCTCTTCCCGGACGACACCATCGTCCGGGAAATCAAGGCCGAAGCCACGTCAGCAAAGTGCCGCCTCGGTGAGGCGGCAGTGCTGATATTCTGCGACCTGGAGAACTCGATCAAGTCGGAGACCGGGAAAACCCCGGTGGCCGGCGGCGCGGTGCACCCGCTCACGCGCTACATCATGAACTACCTGAGGCTCGCGTGCGAGTACAAAGACACGTTGGAAGAGGTATTCAAAGAGCACTCCAAAATCGAGCGTTCGGATTCAACGAGCAGGCCTCATTACGAGGGCGAGGAAAGCAAAGCAAAGAACCAGACAAACAAAGAGAAAGTGTCGCCGTTCGCGGCGCAGTTGATGAGGGTGATGGAGCTTCTGGACTCGAACCTCGAAGGGAAGGCGAAGCTGTACAAGGAAGTTGCACTGAGCTGCATTTTCATGATGAACAACGGAAGGTACATAGTTCAGAAGATAAAAGGTTCTGCGGAGATCTACGAGGTGATGGGAGAAACGTGGTGTCGTAAGAGGTCCACGGAGCTGAGGACTTACCACAAGAATTACCAGATAGAGACGTGGGGTAAGATTCTGAGTTTTCTGAGCCCTAAGGGGCTGAACGACAACGGGAAGGTGCAGAAGCCGGTGCTGAAGGAGCGGTTCAAGAGCTTCAACGCGGCGTTTGAGGAGATTCACAAGACGCAGAGCGCGTGGGTGGTGAGTGACGAACAGCTTCAGTCGGAGCTTAGGGTTTCGATTTCTGCACTCGTGATTCCTGCGTACAGGTCCTTCTTGGGGAGGTTTTCGCAGTACTTGGACCCGGGGAGACAAACGGAGAAGTATATTAAGTACCAGGCTGAGGATGTAGAGACTTACATTGATGAGTTGTTTGATGGGAACCCGCACCATCCGGGCGCGGCTAGGAAGAAAGCATGA 2112 0.5407 MEKNLAETSGSFAHRAEDAASDTTHSPAPEPADKVDAKPDAGETEKPADPDDVQGEQELTEEKKEEEEEETVEAPPESPPPSLEKVSEDIDQFLVTLQSNKNANNKNEATALEVPKSIHTFLDLVEQKIKKHDSGEAKWGERAEEDSLFLESVNRVSKLMNHFTEHAQSQRSEEQEDKDRVKGETDFLINGLGAIQQRAMSFLEEEFRSLMEESRNQNKPDPKWKQPVAEASESEPPAEAVMDFPGFAEETVANLSKIAKEMILGGYENECCQVYAVSRRHAFEEGLHKLLGYEKLSVDEVQKMQWEPLEREIPTWINAWKECAAVWFPGEWRLAESVFADKADTGASLYGDLSRRIAVQLFNFVESVAMTKRAGEKLFKFLDMYETLRDVIPNMENLFPDDTIVREIKAEATSAKCRLGEAAVLIFCDLENSIKSETGKTPVAGGAVHPLTRYIMNYLRLACEYKDTLEEVFKEHSKIERSDSTSRPHYEGEESKAKNQTNKEKVSPFAAQLMRVMELLDSNLEGKAKLYKEVALSCIFMMNNGRYIVQKIKGSAEIYEVMGETWCRKRSTELRTYHKNYQIETWGKILSFLSPKGLNDNGKVQKPVLKERFKSFNAAFEEIHKTQSAWVVSDEQLQSELRVSISALVIPAYRSFLGRFSQYLDPGRQTEKYIKYQAEDVETYIDELFDGNPHHPGAARKKA 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0330 703 MobiDBLite consensus disorder prediction 211 238 - -
Ssu9g0330 703 MobiDBLite consensus disorder prediction 476 501 - -
Ssu9g0330 703 Pfam Exo70 exocyst complex subunit 316 687 IPR046364 GO:0000145|GO:0005546|GO:0006887
Ssu9g0330 703 Gene3D Exocyst complex component Exo70 123 696 - -
Ssu9g0330 703 MobiDBLite consensus disorder prediction 1 109 - -
Ssu9g0330 703 MobiDBLite consensus disorder prediction 92 109 - -
Ssu9g0330 703 PANTHER EXOCYST COMPLEX PROTEIN EXO70 54 693 IPR004140 GO:0000145|GO:0006887
Ssu9g0330 703 MobiDBLite consensus disorder prediction 476 504 - -
Ssu9g0330 703 MobiDBLite consensus disorder prediction 163 182 - -
Ssu9g0330 703 SUPERFAMILY Cullin repeat-like 144 690 IPR016159 -
Ssu9g0330 703 MobiDBLite consensus disorder prediction 29 60 - -
Ssu9g0330 703 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 54 693 - -
Ssu9g0330 703 MobiDBLite consensus disorder prediction 167 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0330 Ssu-Chr9 16456264 16458375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0330 26 692 EXO70 exocyst subunit family AT5G13990 49.857 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0330 K07195 - gmx:100819960 988.408