LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ssu9g0328	ATGGCTACCAACACATTGATGAGTTCTGCTGTATCGGCCTTCCCATCTCTCCTTTCTTCCTCAAAATCCAGATTTGCCACTGCACTTCCACTTTCCAGCTTTGGTTCCAATGCCTCTGCTCGCTTTACCATGACCGCTGACTGGATGCCAGGCCAGCCTAGACCCCCTTACCTTGATGGTTCAGCACCTGGTGACTTTGGATTCGACCCTCTTCGTCTTGGTGAAGTACCAGAGAATCTTGAGAGGTTCAAAGAGTCAGAACTCATTCACTGCAGATGGGCCATGCTTGCAGTTCCAGGAATTTTGGTACCAGAGGCATTGGGCTTAGGCAACTGGGTAAAGGCTCAGGAATGGGCCGCAGTTCCTGGGGGCCAAGCAACCTACCTAGGCAACCCTGTTCCATGGGGCACCCTACCCACCATTCTGGTCATTGAATTCCTTGCTATTTCCTTTGTGGAGCACCAAAGGAGCATGGAGAAAGACCCAGAGAAGAAGAAATACCCTGGTGGTGCTTTTGATCCTTTGGGATACTCTAAGGACCCTAAAACATTCCACGAATACAAAGTCAAAGAAATTAAGAATGGACGTCTTGCCCTGTTGGCTTTTGTGGGATTCTGTGTTCAACAATCAGCCTACCCCGGCACTGGACCCTTGGAGAACTTGGCTGCTCACTTGGCTGATCCATGGCACAACAACATTGGAAATATCATTATTCCCCAATCGATTTCGCCTTGA	735	0.4925	MATNTLMSSAVSAFPSLLSSSKSRFATALPLSSFGSNASARFTMTADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGGQATYLGNPVPWGTLPTILVIEFLAISFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKTFHEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLAAHLADPWHNNIGNIIIPQSISP	244

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ssu9g0328	244	SUPERFAMILY	Chlorophyll a-b binding protein	38	238	-	-
	Ssu9g0328	244	Pfam	Chlorophyll A-B binding protein	55	209	IPR022796	-
	Ssu9g0328	244	PANTHER	CHLOROPHYLL A/B BINDING PROTEIN	23	234	IPR001344	GO:0009765\|GO:0016020
	Ssu9g0328	244	PANTHER	CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTIC	23	234	-	-
	Ssu9g0328	244	Gene3D	Chlorophyll a/b binding protein domain	49	235	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ssu9g0328	Ssu-Chr9	16412404	16414304	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ssu9g0328	1	196	Chloroplast and Mitochondria Gene Families	AT3G54890	80.303	6.77e-107	306

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ssu9g0328	K08907		-	gmx:100305992	465.307