Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0327 ATGTTCCTTGATTTCACCCTCATGACAAATGCTCAATTGCATCAACATATTCGAGAGTCATGGAATTCCTTTGTTTACCTTATTATAGAAAGGGAAGGGGCCTTTGGCTCCTTAAGTTCACCGTCAATGAAGACTCGCAATTTATTGGTTTTTGGTCATGGAGATGGTCTCTGTGTTTGGACTAATACTTCAAAGCCTTTGAGATTTTTGCTGATGGGAGGGGAGCCACTCAATGAATCAGTGGCTCAATGTGGACCTTTTGTGATTAATACACAATCTGAGATTCAGAGAACATTGGCGATGGGCAAGAGATATTAA 318 0.4057 MFLDFTLMTNAQLHQHIRESWNSFVYLIIEREGAFGSLSSPSMKTRNLLVFGHGDGLCVWTNTSKPLRFLLMGGEPLNESVAQCGPFVINTQSEIQRTLAMGKRY 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0327 105 CDD cupin_pirin_C 1 76 - -
Ssu9g0327 105 PANTHER PIRIN-RELATED 1 100 IPR012093 -
Ssu9g0327 105 SUPERFAMILY RmlC-like cupins 2 98 IPR011051 -
Ssu9g0327 105 Pfam Pirin C-terminal cupin domain 2 99 IPR008778 -
Ssu9g0327 105 Gene3D Jelly Rolls 78 99 IPR014710 -
Ssu9g0327 105 Gene3D Jelly Rolls 1 77 IPR014710 -
Ssu9g0327 105 PANTHER OS09G0484800 PROTEIN 1 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0327 Ssu-Chr9 16410682 16410999 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0327 1 100 Calmodulin-binding Proteins AT3G59260 51.485 1.19e-32 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0327 K06911 - mnt:21404588 125.176