Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0315 ATGGCTCCCTCAGACTCGGACACTCTGGGGCGCTATTCTCTGATTCCGAGCTACCTCTATTCCTCTCCCTCACCGCAGAAGAAGATGGAGGCTTCGAGCTTCATGATTCATTCTCCGAGCGAGAATCGCAATATAAAGATGTTTTCGCCGTCCTTCTACGCTGCCTGCACCGTCGGTGGAAGCCTCAGCTGTGGCCTCACTCACACCGCCATCACACCTCTTGACGTTGTCAAATGCAACATACAGATTGACCCTGCCAAGTACAAGAACACCAGAACTGGATTTGGAGTTATGTTTAGGGAGCAGGGGCTGAGGGGCTTTTTCCGCGGATGGGCACCTACCTTGGTGGGTTACCATGCACAAGGTGCCTTCAAATATGGATTCTATGAGTTCTTCAAGAAGTATTATTCTGACATAGCTGGCCCAGAGTATGCAACCAAGTACAAGACATTGATTTACCTAGCCGGTTCGGCATCTTCCGAGTTCATTGCAGCTGTTGCTCTTTGCCCATTTGAGGCTGTGAAGGTCAGAGTTCAAACTCAGCCAGGTTTTGCTAGAGGCCTGGCTGATGGACTACCAAAATTGGTCAGAACTGAAGGAGTCTCAGGGTTGTACAAGGGAATTGTGCCTTTATGGGGAAGACAAGTTCCATATACAATGATGAAGTTTGCTTCTTATGAGAACATAGTTGAGATGATCTATAAGCATGCCATCCCCAAACCAAAAGATGAATGCAGCAAATCCCTGCAACTAGGTGTGAGCTATGTCGGTGGATACATGGCTGGTATATTGTGTGCCGTTGTCTCTCATCCTGCTGATAACCTTGTCTCTTTCCTGAACAATTCCAAAGGGGCAACGGTTGGTGATGCTGTAACGAAGCTTGGATTATGGGGTCTGTTTACCCGTGGTCTTCCTCTACGTATTCTTATGGTTGGAACTCTCACAGGAGCACAATGGGGAATATATGATTCATTCAAAGTTTTTGTGGGGCTGCCAACTACTGGAGGTGTTGCTCCTGCTGCTGTTCCTGTTCCTGCTTCTGCTGCTTAG 1050 0.48 MAPSDSDTLGRYSLIPSYLYSSPSPQKKMEASSFMIHSPSENRNIKMFSPSFYAACTVGGSLSCGLTHTAITPLDVVKCNIQIDPAKYKNTRTGFGVMFREQGLRGFFRGWAPTLVGYHAQGAFKYGFYEFFKKYYSDIAGPEYATKYKTLIYLAGSASSEFIAAVALCPFEAVKVRVQTQPGFARGLADGLPKLVRTEGVSGLYKGIVPLWGRQVPYTMMKFASYENIVEMIYKHAIPKPKDECSKSLQLGVSYVGGYMAGILCAVVSHPADNLVSFLNNSKGATVGDAVTKLGLWGLFTRGLPLRILMVGTLTGAQWGIYDSFKVFVGLPTTGGVAPAAVPVPASAA 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0315 349 PANTHER PHOSPHATE CARRIER PROTEIN 26 341 - -
Ssu9g0315 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 148 232 IPR018108 -
Ssu9g0315 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 249 328 IPR018108 -
Ssu9g0315 349 Pfam Mitochondrial carrier protein 53 137 IPR018108 -
Ssu9g0315 349 Pfam Mitochondrial carrier protein 151 236 IPR018108 -
Ssu9g0315 349 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 26 341 IPR044677 GO:0005315|GO:1990547
Ssu9g0315 349 SUPERFAMILY Mitochondrial carrier 54 323 IPR023395 -
Ssu9g0315 349 Gene3D Mitochondrial carrier domain 52 329 IPR023395 -
Ssu9g0315 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 51 135 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0315 Ssu-Chr9 15994117 15997892 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0315 33 349 Chloroplast and Mitochondria Gene Families AT5G14040 74.843 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0315 K15102 - gmx:100804257 615.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1865 4 34075318 34078464 Ssu9g0315 9 15994117 15997892 PCT