Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0293 ATGAGACCGAGCCGCTGCACTCGTTGGGCCCAGACCAACATTGCCCCACAAAGAGATCTGCTACAGAGGCTTTGGCTTGGCACTTTCGACACCGGCAAGGAAGCCGCTTGCGCCTACGACAACGCGATGCGTGAGTTCCACAACGTGAAAGCCAAGACCAACTTCCCCACGCCCTCGGAGCTCATAAACAACAACGCACGTAGTCCCAGTGGACCTCACCCTCACCTAGCTCCCCACCGCCACCGTTGGCATCGGCGCAGCGATTCTGATTCCTCGTCCGTCGTGGACTACGAGCAGCAAGGACTCTTGGATCTCGACCTCAACGTGCCTTCGCTGTTGGAGGTTGCATGA 351 0.584 MRPSRCTRWAQTNIAPQRDLLQRLWLGTFDTGKEAACAYDNAMREFHNVKAKTNFPTPSELINNNARSPSGPHPHLAPHRHRWHRRSDSDSSSVVDYEQQGLLDLDLNVPSLLEVA 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0293 116 MobiDBLite consensus disorder prediction 54 70 - -
Ssu9g0293 116 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 22 71 - -
Ssu9g0293 116 PANTHER ERF FAMILY PROTEIN 22 71 - -
Ssu9g0293 116 SUPERFAMILY DNA-binding domain 22 57 IPR016177 GO:0003677
Ssu9g0293 116 Gene3D AP2/ERF domain 2 57 IPR036955 GO:0003700|GO:0006355
Ssu9g0293 116 ProSiteProfiles AP2/ERF domain profile. 1 56 IPR001471 GO:0003700|GO:0006355
Ssu9g0293 116 MobiDBLite consensus disorder prediction 54 95 - -
Ssu9g0293 116 SMART rav1_2 2 62 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0293 Ssu-Chr9 15074971 15075449 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0293 23 65 AP2-EREBP Transcription Factor Family AT5G44210 65.116 4.43e-13 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0293 K09286 - gmx:100500601 77.0257