Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0274 ATGGGAACCTCTAATAACCATGATGCTCCTCCTTCTCTACTTCAAGACCTTAAGGTGACCATCCATACATCCTCCATGATTTTCCCATCCaaagagattgagagaaagTCCTTGTTCTTGTCAAACATAGACAAGGTCCTCACCTTTGATGTGGAAACGGTTCACTTCTTTGGTGCCCGAAAAGATTTTCCTCCTCATGTTGTGACTGAGAGGTTCAAGAATGCCCTAGAGGATGCCCTTGTGGTTTATGACTTCTTGGGTGGAAGATTGAAGCTGAACTTTGATACCAAAAGATTAGAGATGGATTGTAACGCAGAGGGAGCTGGGTTCGTGGTGGCTTCCAGCGAGTACAGATTGGATCAGGTTGGGGATTTGGATTATCCAAATCCAGCTTTTGCACAATTGGTACATAAGAATAAGGACTTTCTTAAACATGGTGATGTCCCAGTATGTGTTGCCCAGGTGACATCCTTCAAGTGTGGCGGCTTTGCAATTGGCTTCTCTACTAGCCACACCACCTTCGATGGACTTAGCTTCAAAACCTTCCTAGACAACATTGCTACAATAGCCGCTAAAAAGCCCTTGGTTGTCACGCCCTGCCACGACAGGCACCTCCTGGCCGCCCGATCCCCGCCACGTGTCACCTTCCCACACCCCGAGATGCTCAACCTGGGTGACCTCCCAACAGGCCTCGAGTCCAACATCTTTGAGGTCTCCACCGAACAACTCGAATTCAAGGTTTTCAAACTAACCTCCAATGacatcacaaaattaaaagaagaggCCAAGAATTCAATTAGTGGTGGCACGTGCTCCTCCACACGTGTCACAGGCTTTAACGTTATCACTGCCCACATATGGAGATGCAAGGCACTATCCGGTGATGATGACCCAAATAGGTCATCAACTATACTATATGCTGTGGATATACGTTCAAGGTTGAACCCACCATTGCCCAAATCGTACACGGGGAACGCAGTGTTAACCGCTTATGCCACGGCTAAGTGTAGGGAACTAGAAGAAGTGCCATTTATGAGGTTGGTTGAAATGGTGCGTGAGGGAGCGACAAGGATGACGGATGAGTATGCAAGGTCTATCATAGACTGGGGAGAGATAAACAAAGGGTTTCCAAATGGGGAGGTTTTGGTGTCCTCGTGGTGGAGATTAGGGTTTGAAGAGGTGGATTATCCGTGGGGGAAGCCAAAGTATTGTTGCCCCGTGGTGTATCACAGGAAGgatattgttttgttgttttctcCGGTTGACGGGGGTGATGGGGTGAGTATTATTGTGGCTCTTCCTCCTAAGGAAATGGAAAAATTCCACGGGCTCTTCAACAAGTTCTTGATTCGGGAGTGA 1359 0.4592 MGTSNNHDAPPSLLQDLKVTIHTSSMIFPSKEIERKSLFLSNIDKVLTFDVETVHFFGARKDFPPHVVTERFKNALEDALVVYDFLGGRLKLNFDTKRLEMDCNAEGAGFVVASSEYRLDQVGDLDYPNPAFAQLVHKNKDFLKHGDVPVCVAQVTSFKCGGFAIGFSTSHTTFDGLSFKTFLDNIATIAAKKPLVVTPCHDRHLLAARSPPRVTFPHPEMLNLGDLPTGLESNIFEVSTEQLEFKVFKLTSNDITKLKEEAKNSISGGTCSSTRVTGFNVITAHIWRCKALSGDDDPNRSSTILYAVDIRSRLNPPLPKSYTGNAVLTAYATAKCRELEEVPFMRLVEMVREGATRMTDEYARSIIDWGEINKGFPNGEVLVSSWWRLGFEEVDYPWGKPKYCCPVVYHRKDIVLLFSPVDGGDGVSIIVALPPKEMEKFHGLFNKFLIRE 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0274 452 Gene3D - 234 448 IPR023213 -
Ssu9g0274 452 Pfam Transferase family 17 442 - -
Ssu9g0274 452 Gene3D - 15 222 IPR023213 -
Ssu9g0274 452 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 15 449 - -
Ssu9g0274 452 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 15 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0274 Ssu-Chr9 14234869 14240462 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0274 17 449 Monolignol Biosynthesis Gene Families AT5G48930 32.522 7.36e-55 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0274 K13065 - gmx:100305576 803.897