Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0268 ATGCTCAAAAACTCCGGCCGCCAGCCGCCGCCGCCCCCGGAGTCGCTCTCCGACAAAATCTACCAGCTCCGGGGAGCACTCCTGATGGTGGCGGTCCCGCTTCTCCTCGTCACGCTCGTGCTCTACGTCATGCCTTCCACCTCCTCCAACGAGTCCATCCAAGACTACGCCCTCACGCACCGCAAGGTGGCCCCCGATCGGAAAACCTCCTTCGCCGTCGTCTTCGACGCCGGCAGCTCTGGCAGCCGCGTCCACGTTTTCCGCTTCGACCAGAACTTGGATCTCGTTCGCATCGGGAAGGACCTCGAGCTGTTCGTTCAGATTAAGCCTGGTTTGAGTGCTTATGCACAGAATCCACGACAGGCAGCAGAATCTTTGATTTCTCTTTTGGATAAAGCGGAGAGTGTTGTTCCTCGGGAGTTTCGGCCAAAGACACCCGTTAGAGTTGGGGCTACTGCTGGTTTAAGGGCTTTGGAAGGGGATGCTTCTGACAGGATCTTGCAAGCGGTTCGGGATTTGCTTAAGCAAAGAAGCACTCTAAAATCTGAGCCTCATGCAGTAACTGTGCTGGATGGAACACAAGAAGGTGCTTTTCAATGGgtgaCTATTAACTATCTACTGGGAAACTTGGGAAAAGATTATTCAGAGACTGTTGGGGTAGTTGATCTTGGAGGCGGATCTGTTCAGATGGCATATGCCATCTCAGAGACAGATGCTGCCAAGGCTCCAAAAGTATCAGTTGGAGAGGACCCATATGTCAAGGAGATGTTTTTAAGGGGAAGGAAATATTTCCTCTATGTTCACAGTTACTTGGGCTATGGTTTACTAGCAGCTCGTGCAAAGATTTTAAAGGTTTCGGATGATTCTGGAAACCCTTGCATCTTAGATGGTTTTGACGGATCTTACAATTATGGAGGAAAATCTTTTAAGGCCTCATCCTCCCCTTCTGGTGCAAGCTTGAATGAATGCAAAAGCATAGCTCTTAAGGCTCTCAAGGTTAATGAGTCAACATGTACACATATGAAGTGCACTTTTGGTGGGATATGGAATGGTGGTGGGGGTGATGGACAGAAAAACCTTTTTGTTGCCTCGTTTTTCTTTGACCGGGCAGCTGagGCTGGTTTTGCCGATCCAAACTTACCCGTTGTGAAGGTTCGTCCCGTGGATTTTGAAGATGCAGCTAAGCAAGCTTGTCAAACAAAACTTGAAGATGCCAAATCCAGTTATCAACGTGTTGAGGAAGGGAACCGTCCATATTTATGCACGGATCTCGTATACCAATATACATTGCTTGTTGTTGGATTCGGCCTACATCCATTGCAACAAATTACGTTGGTGAAGAAAGTTAAATATCACAATGCTCTTGTTGAAGCTGCATGGCCCCTAGGCAGCGCCATAGAAGCTGTATCATCTACATAA 1419 0.4827 MLKNSGRQPPPPPESLSDKIYQLRGALLMVAVPLLLVTLVLYVMPSTSSNESIQDYALTHRKVAPDRKTSFAVVFDAGSSGSRVHVFRFDQNLDLVRIGKDLELFVQIKPGLSAYAQNPRQAAESLISLLDKAESVVPREFRPKTPVRVGATAGLRALEGDASDRILQAVRDLLKQRSTLKSEPHAVTVLDGTQEGAFQWVTINYLLGNLGKDYSETVGVVDLGGGSVQMAYAISETDAAKAPKVSVGEDPYVKEMFLRGRKYFLYVHSYLGYGLLAARAKILKVSDDSGNPCILDGFDGSYNYGGKSFKASSSPSGASLNECKSIALKALKVNESTCTHMKCTFGGIWNGGGGDGQKNLFVASFFFDRAAEAGFADPNLPVVKVRPVDFEDAAKQACQTKLEDAKSSYQRVEEGNRPYLCTDLVYQYTLLVVGFGLHPLQQITLVKKVKYHNALVEAAWPLGSAIEAVSST 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0268 472 Gene3D - 71 466 - -
Ssu9g0268 472 CDD NBD_sugar-kinase_HSP70_actin 73 232 - -
Ssu9g0268 472 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 2 472 IPR000407 GO:0016787
Ssu9g0268 472 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 190 205 IPR000407 GO:0016787
Ssu9g0268 472 Pfam GDA1/CD39 (nucleoside phosphatase) family 66 471 IPR000407 GO:0016787
Ssu9g0268 472 Gene3D Exopolyphosphatase. Domain 2 191 450 - -
Ssu9g0268 472 PANTHER APYRASE-LIKE PROTEIN 2 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0268 Ssu-Chr9 13933450 13947417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0268 14 471 Calmodulin-binding Proteins AT3G04080 69.565 0.0 625