Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0228 ATGGATTTCACAGCGGAGAAGAAGGAAGCAGAGaacaacaacagcaataacCCCGAAAATGTTCATCAAACGTTGGATTCTTCTTCTCAATTGGCATCAGCAACTGattccaacaacaataacaacaaagaaaCCGAAGAACGACAAGCTCGTGAACTCAAAGCCGGTCTTCACCCTCTAAAgCACAGGTTTGTCTTTTGGTACACACGTCGAACACCTGGAGTTCGAAATCAAACATCATATGAGGACAACATAAAGAAAATAGTTGATTTTAGTACGGTTGAAGGATTTTGGGTCTGCTATTGCCATCTTGCTCGTCCTTCTTCTTTACCTAGTCCAACAGATTTGCACCTTTTCAAGGAAGGAATTCGTCCTTTATGGGAGGATTCTGCTAACTGCAATGGTGGTAAATGGATTATACGATTCAAAAAGGTTGTCTCAGGTCGTTTTTGGGAGGACCTGGTTCTTGCCTTAGTGGGTGACCAATtggattatggggatcacatatgCGGTGCCGTACTAAGCATTCGTTTCAATGAGGATATATTGAGTGTCTGGAATCGCAATGCTTCAGACCATCAGGCTGTAATGGCTCTGAGAGATTCTATCAAACGTCACTTAAAGCTTCCTCACAGCTATGTTATGGAGTACAAGCCCCATGACGCTTCTCTGCGAGACAATTCATCTTACAGGAACACTTGGTTGAGAGGCTAG 714 0.3978 MDFTAEKKEAENNNSNNPENVHQTLDSSSQLASATDSNNNNNKETEERQARELKAGLHPLKHRFVFWYTRRTPGVRNQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDHICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPHDASLRDNSSYRNTWLRG 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0228 237 MobiDBLite consensus disorder prediction 14 40 - -
Ssu9g0228 237 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 38 237 IPR001040 GO:0003723|GO:0003743|GO:0006413
Ssu9g0228 237 PANTHER BNAA10G16710D PROTEIN 38 237 - -
Ssu9g0228 237 SUPERFAMILY eIF4e-like 30 233 IPR023398 -
Ssu9g0228 237 ProSitePatterns Eukaryotic initiation factor 4E signature. 115 138 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Ssu9g0228 237 MobiDBLite consensus disorder prediction 1 49 - -
Ssu9g0228 237 Pfam Eukaryotic initiation factor 4E 59 217 IPR001040 GO:0003723|GO:0003743|GO:0006413
Ssu9g0228 237 Gene3D RNA Cap, Translation Initiation Factor Eif4e 29 230 IPR023398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0228 Ssu-Chr9 12892059 12896461 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0228 45 237 Eukaryotic Initiation Factors Gene Family AT5G18110 84.974 5.95e-126 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0228 K03259 - gmx:100499744 432.18