Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0220 ATGTCTCACTACAAGTTTGTCCTTGTAATTGAGAGCACTTGGACTGAGAGTTATGTGACAGAAAAGATATTTTATGCCTTGGACTCTGGTGCAATTCCAATCTATTTTGGTGCTGCAAATATCATGGATTTTGTCCCTCCTCATTCAATAATAGAAGGGATGAAATTCAGGTCAATGGAAGAATTGGCTTCATATCTATAG 201 0.3731 MSHYKFVLVIESTWTESYVTEKIFYALDSGAIPIYFGAANIMDFVPPHSIIEGMKFRSMEELASYL 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0220 66 PANTHER ALPHA-(1,4)-FUCOSYLTRANSFERASE 1 66 - -
Ssu9g0220 66 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 1 66 IPR001503 GO:0006486|GO:0008417|GO:0016020
Ssu9g0220 66 Gene3D - 1 66 IPR038577 -
Ssu9g0220 66 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 1 66 - -
Ssu9g0220 66 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 2 66 IPR001503 GO:0006486|GO:0008417|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0220 Ssu-Chr9 12805081 12805281 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0220 1 66 Xyloglucan Fucosyltransferase1 AT1G71990 74.242 2.04e-32 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0220 K14412 - gmx:100792965 128.642