Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0213 ATGGGGCCAAAAACACTCTGCAATGCTTGTGGCGTGCGCTACAAATCAGGCAGGCTGTTCCCCGAATACCGTCCTGCGGCAAGTCCAACGTTTTGCGCAGCCGTGCACTCCAACTCCCATAAGAAGGTCCTTGAAATGAGAAATAAGACAGGCACCAAATCCAGCTTTGCAACTGATTCAGCTGCCTCACCAGAACTTATTCCAAACACTAACGGCAGCCTTTCCCTGGAATACATGTGA 240 0.5042 MGPKTLCNACGVRYKSGRLFPEYRPAASPTFCAAVHSNSHKKVLEMRNKTGTKSSFATDSAASPELIPNTNGSLSLEYM 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0213 79 PANTHER GATA TRANSCRIPTION FACTOR 1 79 - -
Ssu9g0213 79 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 2 42 - -
Ssu9g0213 79 MobiDBLite consensus disorder prediction 53 79 - -
Ssu9g0213 79 PANTHER GATA TRANSCRIPTION FACTOR 8 1 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0213 Ssu-Chr9 12540897 12541136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0213 1 69 C2C2-Gata Transcription Factor Family AT3G54810 73.913 2.08e-30 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0213 - - gmx:100792644 159.458