Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0206 ATGGCTTTGGAGCTGCTTGTGCTTTCTGTCAATCACTTTGATGGAAAAATCCCTGATGAGTTATTGAGTTATGAAAACTTGACTTTGATTGATCTTAGGGCAAACCATCTTTCACAGTCTATTCCTATCAATATTGGGAAGCTTTCTAAATTGGAAACTTTGATCCTTTCCTCTAATTACCTCACTGATTGGGCTAGCAGATACAGTATAGCTGTTGGGGTGGCTCAAggactttcttttcttcacGGATTCGCCTCCAGTCCAATACTACTTCTTGACCTATCAAGTAAAAGTATTATGCTGAAGTCCCTCAAGGAGCCTCTAGTTGGGGATATTGAACACTACAAGGTGATTGATCCCTCAAAGAGTACAGGAAATTTTTCTGCAGTTGCTGGTTCAGTTGGTTATATTCCTCCAGAGTATGCATACACAATGACTGTAACAATGGCCGGCAATGTCTACAGCTTTGGTGTCATTCTGCTTGAATTGCTGACAGGAAAACCTGCAGTGACTGAGGGAACGGAATTGGTCAAGTGGGTTTTGCGTAATTCAACAAACCAGGATTACATTCTTGATTTTAATGTCAGTAGAACATCACAAGCAGTCAGAAACCAGATGCTTGCAATTCTCAAGATTGCTCTTGTTTGTGTTAATACATCCCCAGAAACAAGACCAAAGATGAAGAGTGTGCTACGGATGCTCCTAAATGCTAGATGA 717 0.3989 MALELLVLSVNHFDGKIPDELLSYENLTLIDLRANHLSQSIPINIGKLSKLETLILSSNYLTDWASRYSIAVGVAQGLSFLHGFASSPILLLDLSSKSIMLKSLKEPLVGDIEHYKVIDPSKSTGNFSAVAGSVGYIPPEYAYTMTVTMAGNVYSFGVILLELLTGKPAVTEGTELVKWVLRNSTNQDYILDFNVSRTSQAVRNQMLAILKIALVCVNTSPETRPKMKSVLRMLLNAR 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0206 238 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 3 62 - -
Ssu9g0206 238 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 63 235 - -
Ssu9g0206 238 SUPERFAMILY Protein kinase-like (PK-like) 51 234 IPR011009 -
Ssu9g0206 238 Gene3D Ribonuclease Inhibitor 3 61 IPR032675 -
Ssu9g0206 238 SUPERFAMILY L domain-like 3 66 - -
Ssu9g0206 238 Gene3D Transferase(Phosphotransferase) domain 1 62 238 - -
Ssu9g0206 238 PANTHER F12K21.25 3 62 - -
Ssu9g0206 238 PANTHER F12K21.25 63 235 - -
Ssu9g0206 238 Pfam Protein kinase domain 50 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g0206 238 ProSiteProfiles Protein kinase domain profile. 1 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0206 Ssu-Chr9 12132003 12134826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0206 60 234 Receptor kinase-like Gene Family AT2G41820 51.648 1.51e-50 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Ssu9g0206 Pkinase 4.3e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0206 - - pvu:PHAVU_010G033800g 326.635