Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0201 ATGGAAGATTCAGAGGAAGAGGAGCTTCTGAATCTTACTCTATCAGTTGCTGCTGGCAgggagaggaaaaagaaaggaaggacaagggataataatgttaattctattattattccTATGAACTCCAATGAAGGCTATGAAGGGAAGATCTTTAGGCTCCTCCAAATGAGGGAGCTGATGCTAAGACAAGACCCCAGAAGAAAAGGAGTGGTTGGAGATGGGCATGGCCTACCTTTAATTCATTTGCTTCTCTCAACTGCCACTGCTGTTGATGAAAGAAACTTATGTGCAGCTCTAGAGAACCTCATTGACCTGTACCAAACAGTGTCCCTAACAGGTGACTCAGTTCAACGTGTGGTGGCCTATTTTGCTGATGGTTTGGCTGCAAGACTTCTCACAAGGAAGTCCCCATTCTATGACATGCTCATGGAGGAACCAACAAGTGAGGAAGAGTTTCTTGCATTCACAGATCTCTATAGAGTCTCACCCTATTACCAATTTGCTCATTTCACAGCAAACCAGGCTATCTTGGAGGCCTatgaggaggaggaagagaggAACAACAAAGCACTTCATGTCATTGACTTTGATGTCTCCTATGGCTTCCAATGGCCTTCTCTTATTCAATCACTTTCTGAAAAGGCAACCAGTGGCAACAGAATATCCCTCAGGATAACAGGTTTGGGAAACAACCTGAAGGAACTGCAAGAAACTGAGGCCAGATTAGTTAGCTTCTCAAAGGGGTTTGGTAACCACCTTGTGTTTGAATTCCAAGGGCTGCTAAGAGGCTCATCAAGGGTCATCAAcctaaggaaaaagaaaaatgaaactgTGGCAGTGAACCTTGTTTCTTATTTGAACACTTTAAGTGGTTTCATGAATATCTCTGACACACTGGGATTTGTTCATTCTCTTAACCCCTCCATTGTGGTGTTGGTGAAACAAGAAGGTAGCAGGAGTCTTAAGACCTTCTTGTCAAGGTTCACTGAATCTTTGCACTATTTTGCCGCCATGTTTGATTCACTAGATGATTGCTTGCCCCTTGAGAGCACTGAGAGATTGAGGATAGAGAAGAAGCTTTTGGGGAAAGAGATCAAAAGCATGCTCAACTATGACATGGATGGTGTGGATTGCCCAAAATATGAGAGGATGGAAACATGGAAAGCAAGAATGGAGAATCATGGGTttgttggaagaaaaataagCTCAAAGTGTGTGATCCAAGCAAAGCTGCTTCTGAAGATGAGGACCCATTATTATCCACTACAGTTTGAGGAAGAGGGTGGTGGGGGTTTCAGAGTTTCTGAAAGGGATGAAGGAAGAGTTATCTCTTTGGGGTGGCAAAATAGGGTTCTTCTCATTGTCTCAGCATGGCAACCAGTTTGA 1386 0.4012 MEDSEEEELLNLTLSVAAGRERKKKGRTRDNNVNSIIIPMNSNEGYEGKIFRLLQMRELMLRQDPRRKGVVGDGHGLPLIHLLLSTATAVDERNLCAALENLIDLYQTVSLTGDSVQRVVAYFADGLAARLLTRKSPFYDMLMEEPTSEEEFLAFTDLYRVSPYYQFAHFTANQAILEAYEEEEERNNKALHVIDFDVSYGFQWPSLIQSLSEKATSGNRISLRITGLGNNLKELQETEARLVSFSKGFGNHLVFEFQGLLRGSSRVINLRKKKNETVAVNLVSYLNTLSGFMNISDTLGFVHSLNPSIVVLVKQEGSRSLKTFLSRFTESLHYFAAMFDSLDDCLPLESTERLRIEKKLLGKEIKSMLNYDMDGVDCPKYERMETWKARMENHGFVGRKISSKCVIQAKLLLKMRTHYYPLQFEEEGGGGFRVSERDEGRVISLGWQNRVLLIVSAWQPV 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0201 461 ProSiteProfiles GRAS family profile. 70 459 IPR005202 -
Ssu9g0201 461 Pfam GRAS domain family 79 459 IPR005202 -
Ssu9g0201 461 PANTHER OSJNBA0084A10.13 PROTEIN 8 459 - -
Ssu9g0201 461 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 8 459 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0201 Ssu-Chr9 11993151 11994536 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0201 75 459 GRAS Transcription Factor Family AT1G14920 34.925 3.87e-56 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ssu9g0201 GRAS 4.9e-90 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0201 - - gmx:100798251 789.26