Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0200 ATGGAGCCTCCTTCCCCCTCTCTTCACGTGGAAACCGCACAACCACAACCAGCACCCAGCCCGCTCCGAAAAATGATCGCGGTGTCATCAATCGCCGCGGGAATTCAGTTCGGGTGGGCCCTACAACTCTCCCTCCTCACCCCGTACGTTCAAACCCTAGGCGTCCCTCACGCTTGGGCCTCCTTCATTTGGCTCTGCGGCCCAATCTCCGGCCTGGTGGTCCAGCCCATTGTCGGATACAGCAGCGACCGTTGCACCTCCCGCTTCGGCCGCCGCCGCCCCTTCATCCTCGCCGGCGCCATCGCCGTCGCCGTCGCCGTTTTCCTCATCGGCTACGCTTCCGACATCGGGCACGCCGCCGGCGACGACCTCGCGAAGAAAACCCGCCCCCGCGCCGTCGCGGTCTTCGTCGTCGGCTTCTGGGTCCTCGACGTCGCCAACAACATGCTCCAGGGCCCCTGCCGCGCCTTCCTCGGCGACCTCGCCGCCGGCGACCACCGCAAAACGAGAACCGCCAACGCGTTCTTCTCGTTCTTCATGGCCATCGGCAACGTGCTCGGCTACGCCGCCGGCTCCTACGACAAGCTCCACCGTGTCTTTCCCTTCACGGAAACAAAAGCGTGTGACGTGTTCTGCGCAAACCTCAAAAGCTGTTTCTTCTTCTCAATAGTTCTCCTCCTCGTTCTCTGTTTCGTCGCGCTCCTTTGCGTAAAAGACCCCCAGTTTACACCGCGCGGTGATAATAATGGCGAAAACGACGACGCATCGCGGTCATGCTTTTCGTGCCTCGGGGAACTGATTGGTGCGTTTAGGGGACTTAAGAGGCCGATGTGGATGCTGATGCTGGTGACGGCTGTTAACTGGGTCGCGTGGTTCCCTTACATGTTGTTCGACACTGATTGGATGGGGCGTGAGGTGTACGGTGGTAATGTGGGGGAGAAAGCATACGATTCCGGGGTTCGTGCGGGTGCGTTGGGGCTCCTGCTCAATTCGGTGGTGCTGGCTGTGATGTCGTTGGCGGTGGAACCGTTGGGTCGTTTTGTTGGGGGAGTTAAGTGGTTGTGGGGAATCGTTAACGTTATTCTCGCCGTTTGCATGGCATTGACGGTGCTCATCACCAAGGCCGCTGAACACGAACGGCATCATAACGGCGTTGTCGTTGGGCACCCATCACTCGGTGTGAGAGCTGGTGCATTGACTTTCTTCTCCGTCCTTGGTATCCCTCTCGCGATTACTTTTAGCGTCCCATTTGCTCTAGCATCTATATACTCAAGCACTACAGGCGCAGGCCAAGGTTTATCTTTGGGTGTCCTCAATATTGCAATTGTCGTGCCACAGATGATAGTATCAACAATAAGTGGACCGTGGGATGCTTGGTTTGGTGGTGGCAACTTGCCGGCATTTGTGTTGGGTTCGGTGGCGGCCGCCATCAGTGCCGTATTAGCTATTGTCCTGCTGCCAACACCAAAGCCAGCCGATGTGGCCAAGGCTTCTACCGTCCCCGCGGGGAGTTTCCATTAG 1521 0.5812 MEPPSPSLHVETAQPQPAPSPLRKMIAVSSIAAGIQFGWALQLSLLTPYVQTLGVPHAWASFIWLCGPISGLVVQPIVGYSSDRCTSRFGRRRPFILAGAIAVAVAVFLIGYASDIGHAAGDDLAKKTRPRAVAVFVVGFWVLDVANNMLQGPCRAFLGDLAAGDHRKTRTANAFFSFFMAIGNVLGYAAGSYDKLHRVFPFTETKACDVFCANLKSCFFFSIVLLLVLCFVALLCVKDPQFTPRGDNNGENDDASRSCFSCLGELIGAFRGLKRPMWMLMLVTAVNWVAWFPYMLFDTDWMGREVYGGNVGEKAYDSGVRAGALGLLLNSVVLAVMSLAVEPLGRFVGGVKWLWGIVNVILAVCMALTVLITKAAEHERHHNGVVVGHPSLGVRAGALTFFSVLGIPLAITFSVPFALASIYSSTTGAGQGLSLGVLNIAIVVPQMIVSTISGPWDAWFGGGNLPAFVLGSVAAAISAVLAIVLLPTPKPADVAKASTVPAGSFH 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0200 506 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 12 493 - -
Ssu9g0200 506 Pfam MFS/sugar transport protein 31 290 - -
Ssu9g0200 506 SUPERFAMILY MFS general substrate transporter 23 491 IPR036259 -
Ssu9g0200 506 TIGRFAM GPH_sucrose: sucrose/H+ symporter 21 490 IPR005989 GO:0005887|GO:0008515|GO:0015770
Ssu9g0200 506 PANTHER SUGAR TRANSPORTER 12 493 - -
Ssu9g0200 506 CDD MFS_SLC45_SUC 25 483 - -
Ssu9g0200 506 Gene3D MFS general substrate transporter like domains 19 487 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0200 Ssu-Chr9 11923142 11927669 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0200 7 506 Sucrose Transporter Gene Family AT1G22710 64.961 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0200 K15378 - gmx:100782007 882.478