Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0199 ATGCAGCCTCCTTCCTCGTCGCTTCACGTGGAGACAGAACAACCGGGACCTAGTCCTCTCCGAAAAATGATCGCGGTGTCATCAATCGCCGCGGGAATTCAGTTCGGGTGGGCCCTACAACTCTCCCTCCTCACCCCGTACGTTCAAACCCTAGGCGTCCCTCACGCTTGGGCCTCCTTCATTTGGCTCTGCGGCCCAATCTCCGGCCTGGTGGTCCAGCCCATTGTCGGATACAGCAGCGACCGTTGCACCTCCCGCTTCGGCCGCCGCCGCCCCTTCATCCTCGCTGGCGCCGTCGCAGTCGCCGTCGCCGTTTTCCTCATCGGCTACGCCGCCGACATCGGGCACGCCGCCGGCGACGACATCACGAAGAAAACCCGCCCCCGCGCCGTCGCGGTCTTCGTCGTCGGCTTCTGGATCCTCGACGTCGCCAACAACATGCTCCAGGGCCCCTGCCGCGCCTTCCTCGGCGACCTCGCCGCCGGCGACCACCGCAAAACGAGAACCGCCAACGCATTCTTCTCGTTCTTCATGGCCATCGGCAACGTCCTCGGCTACGCCGCCGGCTCCTACGACAAGCTCCACCGTGTCTTTCCCTTCACGGAAACAAAAGCGTGCAACGTGTTCTGCGCAAACCTCAAAAGCTGTTTCTTCTTCTCAATAGTTCTCCTCCTCGTTCTCTGTATCATCGTGCTCCTTTGCGTGAAAGACCCTCAGTTTACACCGTGCGGTGATAATAATAACGAAAACGACGACGCGTCGCGGTCATGCTTTTCGTGCTTCGGTGAACTGAGCGGTGCGTTTAGGGGACTTAAGAGGCCGATGTGGATGCTGATGCTGGTGACGGCTGTTAACTGGGTCGCGTGGTTCCCTTACGTGTTGTTCGACACTGATTGGATGGGGCGTGAGGTGTACGGTGGTAATGTGGGGGAGAAAGCATACGATTCCGGGGTTCGTGCGGGTGCGTTGGGGCTCCTGCTCAATTCGGTGGTGCTGGCGTTGATGTCGTTGGTGGTGGAACCGTTGGGTCGTTTTGTTGGGGGAGTTAAGTGGTTGTGGGGAATCGTTAACATTATTCTCGCCGTTTGCATGACAATGACGGTGGTCATCACTAAAGTTGCTGAACACGAACGACATCAAAACGGCGCTGCCGTTGGGCATCCGTCGCTCGGTGTGAAAGCTGGTGCATTGACGTTCTTCTCCGTCCTTGGTGTCCCTCTCGCGATTACTTATAGCGTCCCATTTGCTCTGGCATCTATATACTCCAGTACATCAGGAGCAGGCCAAGGTTTATCTTTGGGTGTTCTCAATGTTGCAATTGTCGTGCCACAGATGATAGTCTCGGCAATAAGTGGACAGTGGGATTCTTGGTTTGGTGGTGGCAACTTGCCGGCGTTTGTGTTGGGAGCGGTGGCGGCTGCCATCAGTGCTATATTAGCAGTTGTCCTGCTGCCAACTCCGAAGCCAGACGATGTGGCCAAGGTTTCTGCCGTCCCTGCAGGGAATTTCCATTAG 1515 0.5716 MQPPSSSLHVETEQPGPSPLRKMIAVSSIAAGIQFGWALQLSLLTPYVQTLGVPHAWASFIWLCGPISGLVVQPIVGYSSDRCTSRFGRRRPFILAGAVAVAVAVFLIGYAADIGHAAGDDITKKTRPRAVAVFVVGFWILDVANNMLQGPCRAFLGDLAAGDHRKTRTANAFFSFFMAIGNVLGYAAGSYDKLHRVFPFTETKACNVFCANLKSCFFFSIVLLLVLCIIVLLCVKDPQFTPCGDNNNENDDASRSCFSCFGELSGAFRGLKRPMWMLMLVTAVNWVAWFPYVLFDTDWMGREVYGGNVGEKAYDSGVRAGALGLLLNSVVLALMSLVVEPLGRFVGGVKWLWGIVNIILAVCMTMTVVITKVAEHERHQNGAAVGHPSLGVKAGALTFFSVLGVPLAITYSVPFALASIYSSTSGAGQGLSLGVLNVAIVVPQMIVSAISGQWDSWFGGGNLPAFVLGAVAAAISAILAVVLLPTPKPDDVAKVSAVPAGNFH 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0199 504 CDD MFS_SLC45_SUC 23 480 - -
Ssu9g0199 504 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 8 493 - -
Ssu9g0199 504 TIGRFAM GPH_sucrose: sucrose/H+ symporter 19 490 IPR005989 GO:0005887|GO:0008515|GO:0015770
Ssu9g0199 504 Pfam MFS/sugar transport protein 29 288 - -
Ssu9g0199 504 PANTHER SUGAR TRANSPORTER 8 493 - -
Ssu9g0199 504 SUPERFAMILY MFS general substrate transporter 21 490 IPR036259 -
Ssu9g0199 504 Gene3D MFS general substrate transporter like domains 17 484 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0199 Ssu-Chr9 11911905 11915452 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0199 5 490 Sucrose Transporter Gene Family AT1G22710 65.385 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0199 K15378 - gmx:100782007 852.047