Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0188 ATGGTTGATCCGAATGATGCTAGGAAAGGGTGCAGGAGGAAGGTGAGTCTTAGCAATTGTCAAGGGAGCGCGACTATGTTGACGTTGGATCATGCTGTGATCTTGACTTATCCATCTGACACTGGGTGGCAGTCATTTTTCCAAGGCTTGACGGCATGTAGATCGAATTGTCTTTCGGGTTCGCGTGCCTGTTTTGCTTCTACTTCCTTGTCAGATGGATCGGGACAGTGTGTGATGAAATCAGAAGATTTTGTTAGTGGATATCATGATCCTTCACTGCCTGGCACTACTTATATCAAGGTTTGTCCGCCACTGGCGCCAAATCCGCCACCCTCTTTGGGGGAGACTGTGAGTCAAAAGAGGTCCAGGGTGCCCGCTTGGGTTGTGGTGGTTGTTGTTTTGGGTACCCTTTTGTGTTTGATTGCCTTGGAAGGTGGTTTGTGGATGTGGTGTTGTAGGAACCGCGCGAGGTTTGGTGGGTTGTCTGCTCAGTATGCACTTCTTGAGTATGCTTCTGGTGCGCCGGTGCAGTTCTCGTACAAGGAACTCCAGCAAGCAACGAAGGGGTTCAAGGAGAAGCTTGGAGCTGGTGGATTTGGTGCAGTGTATAGAGGAACACTTGTTAACAAAACTGTTGTTGCAGTAAAGCAACTTGAGGGCATTGAGCAAGGTGAGAAGCAGTTTAGGATGGAAGTTGCCACTATAAGTAGCACTCATCATCTGAATTTGGTGAGGCTTATTGGCTTTTGCTCGGAAGGGCGCCACCGGCTTCTGGTTTATGAGTTCATGAAAAATGGGTCTCTTGACAATTTTCTATTCCTGACAGAACAGCATTCGGGAAAATTGTTGAATTGGGAGTATCGATACAACATTGCCCTGGGCACTGCAAGAGGCATCACATACCTGCATGAGGAGTGCCGTGACTGCATAGTCCATTGTGACATAAAACCCGAAAACATTCTCTTGGATGAGAACTATGTTGCCAAAGTCTCTGATTTTGGTCTTGCAAAGCTCATTCATCCCAAGGACCACAGGCATCGGACCTTGACAAGTGTGAGAGGAACCAGAGGATATTTAGCCCCTGAGTGGCTTGCGAATCTTCCCATAACATCCAAATCTGATATTTATAGCTACGGCATGGTTTTGTTGGAGGTTGTGAGTGGGAGGAGGAATTTTGATGTCTCAGAGGAAACAAATAGGAAGAAGTTCTCCATTTGGGCCTATGAAGAGTTTGAGAAAGGTAACATCAGTGGAATTTTGGACAAAAGACTAGCTGACCAAGAAGTTGATATGGAGCAAGTACGAAGAGCAATTCTGGCAAGCTTTTGGTGCATCCAAGAGCAGCCATCTCAGAGACCAACAATGAGCAGAGTGCTGCAAATGCTAGAAGGGGTAACAGAGATTGAAAAGCCACCTGCCCCAAAATCAGTGATGGAAGGACCTGCTAGTGGAACCAGCACATGGGTGAGTAGCAATGCCAGTGCATTCTCCACAATTGGAGTTTCACCCCGTGGTCCCTCCTCTTCATCATCATTTCAGACTACTGGTGTTTCAACCTTCACCTCAGGAAGGAACACTGAGAAGGCAAGCTCATCCTTTTTACAATCAGACACATGA 1617 0.4694 MVDPNDARKGCRRKVSLSNCQGSATMLTLDHAVILTYPSDTGWQSFFQGLTACRSNCLSGSRACFASTSLSDGSGQCVMKSEDFVSGYHDPSLPGTTYIKVCPPLAPNPPPSLGETVSQKRSRVPAWVVVVVVLGTLLCLIALEGGLWMWCCRNRARFGGLSAQYALLEYASGAPVQFSYKELQQATKGFKEKLGAGGFGAVYRGTLVNKTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLIGFCSEGRHRLLVYEFMKNGSLDNFLFLTEQHSGKLLNWEYRYNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYVAKVSDFGLAKLIHPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDIYSYGMVLLEVVSGRRNFDVSEETNRKKFSIWAYEEFEKGNISGILDKRLADQEVDMEQVRRAILASFWCIQEQPSQRPTMSRVLQMLEGVTEIEKPPAPKSVMEGPASGTSTWVSSNASAFSTIGVSPRGPSSSSSFQTTGVSTFTSGRNTEKASSSFLQSDT 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0188 538 ProSiteProfiles Protein kinase domain profile. 188 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g0188 538 SUPERFAMILY Protein kinase-like (PK-like) 171 463 IPR011009 -
Ssu9g0188 538 Gene3D Transferase(Phosphotransferase) domain 1 263 476 - -
Ssu9g0188 538 CDD STKc_IRAK 194 464 - -
Ssu9g0188 538 PANTHER G-TYPE LECTIN S-RECEPTOR SERINE/THREONINE-PROTEIN KINASE 2 528 - -
Ssu9g0188 538 Gene3D Phosphorylase Kinase; domain 1 161 262 - -
Ssu9g0188 538 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672|GO:0006468
Ssu9g0188 538 PANTHER OS07G0415500 PROTEIN 2 528 - -
Ssu9g0188 538 ProSitePatterns Protein kinases ATP-binding region signature. 194 216 IPR017441 GO:0005524
Ssu9g0188 538 Pfam Protein kinase domain 191 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g0188 538 MobiDBLite consensus disorder prediction 499 538 - -
Ssu9g0188 538 SMART serkin_6 188 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0188 Ssu-Chr9 11284749 11286365 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0188 161 472 Receptor kinase-like Gene Family AT5G20050 42.769 7.01e-84 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Ssu9g0188 Pkinase 4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0188 - - gmx:100795819 959.903