Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0187 ATGTTCCTCAAAACCCAATTTCTGTTCCTCACCCTTGTTTTAGCAACCACCACCGTGACCACCGCCGTAAACCCAGGTTCCACCCTCTCGGCCTCTTCCAACCAAACGTGGTCTTCTAGCAGCGCCACCTTCTCCCTCGGCTTCGTCGCCGTTCAGCCACCAACCACCCCTCCTTCCTTCGTCGCCGCCATCGTCTACGCCGGCGGCGCCCCCGTCGTCTGGTCCGCCGGAAACGGCGCCGCCGTGGACTCCGGCGGGTCCCTCCAGTTCCTCCAGTCCGGCGCCCTCCGCCTCGTGAACGGCTCCGGCGCCACCGCGTGGGACTCCGGCACGGCGAACCGCGGTGCCACGTCGGCAACCCTCGAAGACAGCGGCAATCTGGTAATTTCCAACGGCACCGGCACCCTCTGGTCAAGCTTTGACCACCCCACTGACACCCTATTGCCCTCTCAGAATTTCACCGTTGGTGAGGCTCTCACTTCTGAAAGTTACTCTTTTGGTCTCAGTTCAATTGGGAATTTGACCCTGAAGTGGAACAATAGCGTGGTGTACTGGACCCAGGGTTTGAATTCTTCCGTGAATGTGAGTTTGGATTCCCCTGTGTTGGGGTTGACAGCAATTGGGCTTTTGCAACTTTCTGATGTGAATTTGAGCCGTCCTGTTGATATTGCTTATAGTAGTGACTATGCCGAGGGGAATAGCGGTGATGTGTTGAGGGTGTTGAAGTTGGATAATGATGGGAATTTGAGGATTTATAGTACTAATAAGGGTAGTGGAAGTGCTACTGTTAGATGGGCTGCTGTTGAGGATCAATGTGAGGTTTATGCTTATTGTGGGAACTACGGTGTGTGCGGTTACAACGATTCGAGCCAGGTTTGCGGCTGCCCGTCTGAGAATTTCGAGATGGTTGATCCGAATGATGCTAGGAAAGGGTGCAGGAGGAAGGTTAGTCTCAACAACTGTCAAGGGAGCGCGACTATGTTGACGTTGGATCATGCTGTGATCTTGAGTTATCCCCCTGAGGCTGCGTCGCAGTCATTTTTCACGGGGATATCGGCGTGTAGAGGGAATTGTCTTTCGGGTTCGCGTGCCTGTTTTGCTTCTACCGCCTTGTCGGATGGCACGGGACAGTGTGTGATGAAATCGGAAGATTTTGTTAGTGGATATTATAATCCTTCACTGCCTAGCACTTCTTTTTTCAAGGTTTGTCCGCCGCTGGCGCTGAATCCTCCACCCTCTCTGGGGGAGACTGTGGGTCAAAAGAGGTCCAGGGTGCCTGCCTGGGTTGTGGTGGTTGTCGTTTTGGGTACCCTTTTGGGTTTGATTGCCTTGGAAGGTGGTTTGTGGATGTGGTGTTGTAGGTTCAGCGCGAGGCTTGGCGGGTTGTCTGCTCAGTATGCGCTTCTTGAGTATGCTTCTGGCGCGCCGGTGCAGTTCTCGCACAAGGAACTCCAGCAAGCGACAAAGGGGTTCAAGGAGAAGCTTGGAGCTGGTGGATTTGGTGCTGTGTATAGAGGAACTCTTGTTAACAAAACTGTTGTTGCCGTGAAGCAGCTTGAGGGCATTGAGCAAGGCGAGAAGCAGTTTAGGATGGAAGTTGCCACTATAAGTAGCACTCATCATCTGAATTTGGTGAGGCTTATTGGCTTTTGCTCGGAAGGGCGCCACCGGCTTCTGGTTTATGAGTTCATGAAAAATGGGTCTCTTGACAATTTTCTCTTCCCGACAGAACCGCATTCGGGGAAATTGTTGAATTGGGAGTATCGATACAATGTTGCCCTGGGCACTGCAAGAGGCATCACGTACCTGCACGAGGAGTGTCGTGACTGCATCGTCCATTGTGACATAAAACCCGAAAACATTCTCTTGGATGAGAATTATGTTGCCAAAGTCTCTGATTTTGGTCTTGCAAAGCTCGTTAATCCCAAGGACCACAGGCAGCGGACCTTGACCAGTGTGAGAGGAACCAGAGGATATTTAGCCCCCGAGTGGCTTGCGAATCTTCCCGTAACATCAAAATCTGATGTTTATAGCTATGGAATGGTTTTGTTGGAGACTGTGAGCGGGAGGAGGAATTTTGATGTGTCAGAGGAAACAAATAGGAAGAAGTTCTCCATTTTGGCCTATGAAGAGTTTGAGAAAGGTAACATCAGTGGAATTTTGGACAAAAGACTAGCTGACCAAGAAGTTGATATGGAGCAAGTAAGAAGAGCAATTCAGGCAAGCTTTTGGTGCATCCAAGAGCAGCCATCTCAGAGACCAACAATGAGCAGAGTGCTGCAAATGCTAGAAGGGGTAACAGAGATTGAAAAGCCACCTGCCCCAAAATCAGTGATGGAAGGACCTGTTAGTGGAACCGGCACATACCTGAGTAGCAATGCCAGTGCATTATCCACAATTGGAGCTTCACCCCCTGGTCCCTCCTCTTCGTCATCATTTCAGACTAGTGGTGTTTCAACCTTCACCTCAGGAAGGAACACTGAGAAGGCAACTTCATCCCTTTTACAATCAGACACATGA 2520 0.5083 MFLKTQFLFLTLVLATTTVTTAVNPGSTLSASSNQTWSSSSATFSLGFVAVQPPTTPPSFVAAIVYAGGAPVVWSAGNGAAVDSGGSLQFLQSGALRLVNGSGATAWDSGTANRGATSATLEDSGNLVISNGTGTLWSSFDHPTDTLLPSQNFTVGEALTSESYSFGLSSIGNLTLKWNNSVVYWTQGLNSSVNVSLDSPVLGLTAIGLLQLSDVNLSRPVDIAYSSDYAEGNSGDVLRVLKLDNDGNLRIYSTNKGSGSATVRWAAVEDQCEVYAYCGNYGVCGYNDSSQVCGCPSENFEMVDPNDARKGCRRKVSLNNCQGSATMLTLDHAVILSYPPEAASQSFFTGISACRGNCLSGSRACFASTALSDGTGQCVMKSEDFVSGYYNPSLPSTSFFKVCPPLALNPPPSLGETVGQKRSRVPAWVVVVVVLGTLLGLIALEGGLWMWCCRFSARLGGLSAQYALLEYASGAPVQFSHKELQQATKGFKEKLGAGGFGAVYRGTLVNKTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLIGFCSEGRHRLLVYEFMKNGSLDNFLFPTEPHSGKLLNWEYRYNVALGTARGITYLHEECRDCIVHCDIKPENILLDENYVAKVSDFGLAKLVNPKDHRQRTLTSVRGTRGYLAPEWLANLPVTSKSDVYSYGMVLLETVSGRRNFDVSEETNRKKFSILAYEEFEKGNISGILDKRLADQEVDMEQVRRAIQASFWCIQEQPSQRPTMSRVLQMLEGVTEIEKPPAPKSVMEGPVSGTGTYLSSNASALSTIGASPPGPSSSSSFQTSGVSTFTSGRNTEKATSSLLQSDT 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0187 839 Pfam D-mannose binding lectin 72 155 IPR001480 -
Ssu9g0187 839 MobiDBLite consensus disorder prediction 796 839 - -
Ssu9g0187 839 ProSiteProfiles Bulb-type lectin domain profile. 144 264 IPR001480 -
Ssu9g0187 839 CDD STKc_IRAK 495 765 - -
Ssu9g0187 839 Gene3D - 16 141 IPR036426 -
Ssu9g0187 839 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 189 IPR036426 -
Ssu9g0187 839 SMART serkin_6 489 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g0187 839 Gene3D Transferase(Phosphotransferase) domain 1 564 776 - -
Ssu9g0187 839 ProSiteProfiles Protein kinase domain profile. 489 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g0187 839 PANTHER G-TYPE LECTIN S-RECEPTOR SERINE/THREONINE-PROTEIN KINASE 7 829 - -
Ssu9g0187 839 PANTHER OS07G0415500 PROTEIN 7 829 - -
Ssu9g0187 839 Pfam Protein kinase domain 492 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g0187 839 SMART blect_4 28 143 IPR001480 -
Ssu9g0187 839 SUPERFAMILY Protein kinase-like (PK-like) 473 764 IPR011009 -
Ssu9g0187 839 Gene3D Phosphorylase Kinase; domain 1 462 563 - -
Ssu9g0187 839 ProSitePatterns Protein kinases ATP-binding region signature. 495 517 IPR017441 GO:0005524
Ssu9g0187 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672|GO:0006468
Ssu9g0187 839 PIRSF SRK 1 815 IPR024171 GO:0004674
Ssu9g0187 839 ProSiteProfiles Bulb-type lectin domain profile. 20 142 IPR001480 -
Ssu9g0187 839 Pfam S-locus glycoprotein domain 236 296 IPR000858 GO:0048544
Ssu9g0187 839 Gene3D - 144 269 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0187 Ssu-Chr9 11257194 11259713 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0187 450 773 Receptor kinase-like Gene Family AT5G20050 42.136 1.57e-83 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Ssu9g0187 Pkinase 1.3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0187 - - gmx:100795819 1419.45