Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0186 ATGTCAATATTCCATTCCATGTCCCTTCTACCAAGCAATACCTTATTTAACCATCCCTCATTACACATACAAAACGAGAAACACATGCCAAGTACTAAAATCACAATGCTCAGAAGAATAAAAGCTCTGCTACTTTCTCTTACCCTTTTCATGATTTCAGTTGTTGCCATCTCACCAAGCTCAACCCTTTATGCTTCAGACACAAGCCAAGCATGGTCATCCCCCAACAACACattctctcttcattttcttcaagtTCAACCCCCAACTTCTCCTCCTTCCTACATGGTTGGTATTGTCCACTCAGGAGGTGTCCCTATCATTTGGACTGTGGGTGGTGGAAGCGGAAACTTTGTGGACTCAAGAGGTTCATTCCAATTGCTCTCAAATGGAAGCTTGCAACTTGTTGATGGGTCTGGTGCCATAGTATGGGACTCAGGAACTTCCCATTTGGGTGTCTCCTCTGCCTTCCTTGATGAGCAAGGCAACTTGGTTCTTTCCAATGGCACTAGCACTGTGTGGTCCAGCTTTGACCACCCCACTGATACCATTGTGCCATCTCAGAACTTCACTcctaacatgattttaaaatctGGTTTGTACTCATTTAGGCTTCACCCTTTGGGTAATCTCTTGCTTAGCTGGAATGGAAGTGATGTGTATTGGAACCACACCTTGAGTGATTCCATAAATTGGGCTTTAACTTGGCCAATATTGGTGTTGGAGCCTGAGGGAAAAGTATCAGTTCATGATCCAAATTTGACTAGCACTGTGGTAGTTGCTTATAGCAGTGACTATGCAGAGGGAAGTGATGTTCTGAGAGTGTTGAAGTTGGATGGCGATGGGAATTTGAGGATTTATAGTTCATCTAAAGGGAATGAAACTGCAATCATAAGATGGGCTGCTGTGAAAGATCAATGTGATGTTCATGGATACTGTGGAACATATGGTATTTGTAGATACAAGGACTCAGGTCCTGTTTGTGGATGTCCATCTCAGGATTTTGAGATGGTTGATCCAAATAATAGTAGGAATGGGTGTAGGAGGAAGGTGCAGCTAGAGGATTGTCCTAAAAGGGTGGGGATGTTGCAATTGGACCATAGTAGACTCTTGACTTACCCTTCTATTGCTCAATACAAGATTAACCCAGAGGTGTTGTATATTCCTATGTCAGCTTGTAGAGGAAATTGTCTTTCAGCTGATTCTTGTTTTGCTTCTACTTCCTTGTCAGATGGATCAGGATTTTGTTATGTGAAGACAAAAGACATTTTTGGCGGCTATCAGAGTCCCGCACTAACCAGCACTACATATATCAAGGTATGTCTTCCACTGGCTCCAAACTCTTCACCAATTCCTTGGAAGGAAAAAGATTGGAGCATGCATGCTTGGATAATAGTGGTACTTGTTTTTGGTACCCTTTTAGGTTTAACTGCCTTTCAGGGTGGTTTATGGTTGTGGTGTTGCAGAAACATTCAAAGATTTGGAGGATTATATGGACAGTATGATCTCGTGGAGTATGCTTCTGGTGCACTAGTTCAGTTCTCATATAAGGAGCTCAAAGGCCTCACAAATGGGTTCAAGGAGAAGCTTGGTGCTGGGAGATTTGGTTCTGTTTATAGAGGAATGCTTGGTAATGGAACTGTTGTTGCGGTTAAGCAACTTCAGGGAATTGAACTAGAGGAGAAACAATTTAAGTTGGAAATTGCTACCGTGTGTAGTACTCATCATATGAATTTGGTGCGAATGATTGGTTTTTGCTCTGAAAGGAAACACAAGCTTTTGGTATATGAGTACATGAAAAATGGGTCGCTTGATAAATTTCTTTTTGGACAATCAGGAACATTGTTGGATTGGGAGTGTCGGTTCAACATTGCCCTGGGATGTGCAAGGGGTATCATGTATATTCATGAAGAGTGTCATAACTGCATAGTCCATTGCAATATTAAACCTGAAAACATTCTCTTGGATGAGAATTTCAAGGCCAAACTCTCAGATTTTAACCTTGTAAAGTTCATAATTCCCGAGGACTGCAGGTACCAAACCATGGTAAATATGAGAGAAACCAAAGGATATGTAGCTCCAGAATGGCTTTCAAATCTTTCAGTAACTTCAAAGTCTGATGTTTACAGCTATGGTATGGTTTTGCTGGAGATAGTGAGTGGAAGGAGGAACTTTGAAATCTCAGAAGAGACCAACAATAAAGAGTTCTCAGTTTGGGCTTATGAAGAGTTTGAGAAAGGTAATATGATGGGAATTGTTGACAAAAGACTACCTGAAGTTAATTTGGATCAATTGAAAAGGTTGATTCAAGCAAGCTTTTGGTGCCTTCAGGAGCAACCATCTCAGAGGCCAGCAATAAGCAAAGTATTGCACATGCTAGAAGGTGTTACAAAGATTAAGAAACCACCAGCACCAAAATAA 2421 0.4073 MSIFHSMSLLPSNTLFNHPSLHIQNEKHMPSTKITMLRRIKALLLSLTLFMISVVAISPSSTLYASDTSQAWSSPNNTFSLHFLQVQPPTSPPSYMVGIVHSGGVPIIWTVGGGSGNFVDSRGSFQLLSNGSLQLVDGSGAIVWDSGTSHLGVSSAFLDEQGNLVLSNGTSTVWSSFDHPTDTIVPSQNFTPNMILKSGLYSFRLHPLGNLLLSWNGSDVYWNHTLSDSINWALTWPILVLEPEGKVSVHDPNLTSTVVVAYSSDYAEGSDVLRVLKLDGDGNLRIYSSSKGNETAIIRWAAVKDQCDVHGYCGTYGICRYKDSGPVCGCPSQDFEMVDPNNSRNGCRRKVQLEDCPKRVGMLQLDHSRLLTYPSIAQYKINPEVLYIPMSACRGNCLSADSCFASTSLSDGSGFCYVKTKDIFGGYQSPALTSTTYIKVCLPLAPNSSPIPWKEKDWSMHAWIIVVLVFGTLLGLTAFQGGLWLWCCRNIQRFGGLYGQYDLVEYASGALVQFSYKELKGLTNGFKEKLGAGRFGSVYRGMLGNGTVVAVKQLQGIELEEKQFKLEIATVCSTHHMNLVRMIGFCSERKHKLLVYEYMKNGSLDKFLFGQSGTLLDWECRFNIALGCARGIMYIHEECHNCIVHCNIKPENILLDENFKAKLSDFNLVKFIIPEDCRYQTMVNMRETKGYVAPEWLSNLSVTSKSDVYSYGMVLLEIVSGRRNFEISEETNNKEFSVWAYEEFEKGNMMGIVDKRLPEVNLDQLKRLIQASFWCLQEQPSQRPAISKVLHMLEGVTKIKKPPAPK 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0186 806 Gene3D Phosphorylase Kinase; domain 1 499 598 - -
Ssu9g0186 806 PANTHER G-TYPE LECTIN S-RECEPTOR SERINE/THREONINE-PROTEIN KINASE 43 806 - -
Ssu9g0186 806 Gene3D - 56 178 IPR036426 -
Ssu9g0186 806 Pfam D-mannose binding lectin 120 193 IPR001480 -
Ssu9g0186 806 CDD STKc_IRAK 530 795 - -
Ssu9g0186 806 ProSitePatterns Protein kinases ATP-binding region signature. 530 552 IPR017441 GO:0005524
Ssu9g0186 806 ProSiteProfiles Bulb-type lectin domain profile. 54 179 IPR001480 -
Ssu9g0186 806 ProSiteProfiles Protein kinase domain profile. 524 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g0186 806 SUPERFAMILY alpha-D-mannose-specific plant lectins 116 224 IPR036426 -
Ssu9g0186 806 Pfam S-locus glycoprotein domain 258 331 IPR000858 GO:0048544
Ssu9g0186 806 SUPERFAMILY Protein kinase-like (PK-like) 508 794 IPR011009 -
Ssu9g0186 806 Gene3D - 179 301 IPR036426 -
Ssu9g0186 806 PANTHER OS07G0415500 PROTEIN 43 806 - -
Ssu9g0186 806 Pfam Protein kinase domain 527 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g0186 806 SMART blect_4 60 180 IPR001480 -
Ssu9g0186 806 PIRSF SRK 27 806 IPR024171 GO:0004674
Ssu9g0186 806 Gene3D Transferase(Phosphotransferase) domain 1 599 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0186 Ssu-Chr9 11252090 11254510 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0186 507 805 Receptor kinase-like Gene Family AT5G38280 40.717 2.35e-67 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Ssu9g0186 Pkinase 8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0186 - - gmx:100810753 1008.44