Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0175 ATGGAAGTGAGAAAAACGTTATTCTCTACACCATATGGGAGAGGTGATGGAAATGGAAGTAGTTGGGCAAGCATTAAAGGTTTTTCCCTCCAAGTCCTTACAGGGAGGTGGTTCATgattttttcatcatttatgATCATGTCAGTGGCAGGAGCAAGCTACATGTTTGGCCTCTACTCCCGGGAAATCAAGTCAGCTCTTGGCTATGACCAATCCACTCTTAATCTGTTAAGCTTCTGCAAGGACTTGGGTGCCAACATAGGCATTCATTCAGGCCTGATCAACGAGGTCACACCCCCTTGGGTTAGCTTAGTAATTGGGGGGGTTCTCAACTTTTTTGGGTACTTTGTGATTTGGCTTATTGTCACCAGCAAAATTGCAAAGCCCCAGGTGTGGATCATGTGCTTGTACATTTTCATTGGAGCCAATTCCCATTGCTCAACCAACACTGGAGCTCTTGTGACCAGTGTAAAGAACTTCCCTGGCATCAGGGGCATTGTCTTGGGCATTTTGAGTGGGTATCAGGGTTTAAGTGCAGCAATAATTACTCAGCTATACTATGCCTTCTATGGAAATGACTCCAAATCCCTGATTTTGCTCATGGCATGGCTACCAACTGTTACAGCTTTTGTCTTCCTTCCGGTTATCCGAAACCACAGGGGTATTCAACAGCCAAATGACACCATAGCTTTCCTTAGGTTCCTCTATTTGACACTAGTCCTTGCGGGGTTCCTCCTGATTCTAATTGTACTACAAAATTGTTTCACCTTCTCTCAAAGGGAGTATTATGTTACTACCACTGTGATGCTTCTTTTGCTCATCCTTCCACTTACTTTTGTTATCGTGGAAGAACACAAGATTTGGAAGAGTAGACAAGAAAATATCAGTAGGGAAGATGGTCAAATGCTGTTGGCAAACTATGCAAATATAGCTACAGAAAATCCTTATCAAGAGAAGTCTTCCCAGGCCTCCCATACAGAACAAACTGTACAAGAAAAAGTTTCCTGTTGGGAAAACATACTCAGCCCCCCAGAAAGGGGTGAAGATCATACAATACTTCAAGCTATTTTTAGCCTTGACATGGTGATTCTCTTATTAGCTTCTGTATGTTCACTTGGTAGCAACATGACTATGGTAAATAACTTAAGTCAAATTGGAACTTCATTAGGATATCCTGCACATACCATAACCACATTCGTCTCCCTTACGGCCATTTGGAAGTATCTAGGTAACATCGTTCAAGGGGTTGTCTCAGAATATATGATAACCAAATTTAGAATCCCTAGGCCTCTCATGCTCACATCATTACTTCTATTATCTTGTGTTGGTCATCTTTTAATTGCATTCAATGTCCCAAATGGTCTCTATGTAGCCTCAATTGTTATTGGGTTCTGCTTTGGGGCTAACTGGCCATTACTTTTTTCCATCACATCTGAACTTTTTGGCCTTAAACATTATTCAGCATTGTACAATGTTGGGTCAATAACAAGTCCAATTGGGTCATACTTGCTCAATGTAAGGGTTGCAGGGTATCTGTATGACAGGGAAGCCAGAAGACAAATGGAAGCTTTGGGGCAAAAGACAAGGCCAGGGGAGGAGCTGAACTGCAATGGGGATGAGTGCTACAAACTGGCTTTCATTATAATCACTGCAGTTTGCATGTTTGGGGCACTTTTGTCACTCGTTTTGGTCTTTAGGACTAAACAATTTTACAGAAGTGACCTATACAAGAAATTCAAAGATGGTAGAACTGATGAGACTGAAACAGCTTTGTCTTAG 1779 0.4154 MEVRKTLFSTPYGRGDGNGSSWASIKGFSLQVLTGRWFMIFSSFMIMSVAGASYMFGLYSREIKSALGYDQSTLNLLSFCKDLGANIGIHSGLINEVTPPWVSLVIGGVLNFFGYFVIWLIVTSKIAKPQVWIMCLYIFIGANSHCSTNTGALVTSVKNFPGIRGIVLGILSGYQGLSAAIITQLYYAFYGNDSKSLILLMAWLPTVTAFVFLPVIRNHRGIQQPNDTIAFLRFLYLTLVLAGFLLILIVLQNCFTFSQREYYVTTTVMLLLLILPLTFVIVEEHKIWKSRQENISREDGQMLLANYANIATENPYQEKSSQASHTEQTVQEKVSCWENILSPPERGEDHTILQAIFSLDMVILLLASVCSLGSNMTMVNNLSQIGTSLGYPAHTITTFVSLTAIWKYLGNIVQGVVSEYMITKFRIPRPLMLTSLLLLSCVGHLLIAFNVPNGLYVASIVIGFCFGANWPLLFSITSELFGLKHYSALYNVGSITSPIGSYLLNVRVAGYLYDREARRQMEALGQKTRPGEELNCNGDECYKLAFIIITAVCMFGALLSLVLVFRTKQFYRSDLYKKFKDGRTDETETALS 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0175 592 CDD MFS_Mch1p_like 35 557 - -
Ssu9g0175 592 Gene3D MFS general substrate transporter like domains 356 572 IPR036259 -
Ssu9g0175 592 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 17 589 - -
Ssu9g0175 592 Pfam Major Facilitator Superfamily 364 567 IPR011701 GO:0022857|GO:0055085
Ssu9g0175 592 Pfam Nodulin-like 36 280 IPR010658 -
Ssu9g0175 592 PANTHER MFS TRANSPORTER 17 589 - -
Ssu9g0175 592 SUPERFAMILY MFS general substrate transporter 21 222 IPR036259 -
Ssu9g0175 592 SUPERFAMILY MFS general substrate transporter 239 569 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0175 Ssu-Chr9 10901704 10903482 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0175 19 581 Nodulin-like Gene Family AT2G39210 58.172 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0175 - - gmx:102661181 962.985