Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0092 ATGAGGAAAACAGCCACCAAGAAAGTTTCTTCTGGAAGCCCATGGTACGGCCCAGACCGTGTCAAGTACTTGGGTCCACTCTCCGGTGAGCCCCCATCCTACCTCACTGGTGAGTTCCCAGGTGACTATGGTTGGGACACTGCTGGGCTTTCTGCTGACCCAGAAACATTCGCCAAAAACCGCGAACTTGAAGTCATCCACTGCAGATGGGCCATGTTGGGAGCCCTGGGCTGTGTCTTCCCAGAACTTTTGGCCCGTAATGGTGTCAAGTTCGGTGAGGCCGTGTGGTTCAAGGCTGGGTCTCAGATATTCAGTGAAGGTGGGCTTAACTACTTGGGCAACCCAAACCTGATCCACGCACAAAGCATCCTTGCCATCTGGGCCTCTCAAGTTATCTTGATGGGTGCCGTTGAGGGTTACCGTATTGCCGGTGGGCCTCTCGGGGAGGTGACTGACCCACTCTACCCAGGTGGCAGCTTTGACCCATTGGGCCTTGCTGATGACCCAGAGGCTTTTGCTGAGTTGAAGGTGAAAGAGATCAAGAATGGTAGGTTGGCCATGTTCTCCATGTTTGGATTCTTCGTTCAGGCCATTGTGACCGGAAAGGGACCTTTGGAGAACCTCGCTGACCACCTCGCTGACCCAGTGAACAACAATGCTTGGGCCTATGCCACCAACTTTGTCCCTGGAAAGTGA 696 0.5388 MRKTATKKVSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLNYLGNPNLIHAQSILAIWASQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0092 231 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 231 - -
Ssu9g0092 231 SUPERFAMILY Chlorophyll a-b binding protein 14 228 - -
Ssu9g0092 231 Pfam Chlorophyll A-B binding protein 31 197 IPR022796 -
Ssu9g0092 231 Gene3D Chlorophyll a/b binding protein domain 22 224 - -
Ssu9g0092 231 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 231 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0092 Ssu-Chr9 7890449 7891144 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0092 1 231 Chloroplast and Mitochondria Gene Families AT2G34420 90.558 7.49e-155 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0092 K08912 - qsu:112030611 471.47