Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0076 ATGGCAAGGAAGAGGTTCTGCGACTACGATGTCATCACAAACTTCAAACCTTTCACCGACACTGACGATGACACCGAATCCGAGTTCCTCAAGTCACATTCCAAGTCTGAGATTGTCGATGTGCTCTGCAAACACACCTACGATGACAAGATCCAGCAGAGCATGCACAACGAGAGGTGCCGCCACGACCGCAAGACAAACATGTTGTGTCGAGCGGCACGTGTGACCAGGTGTGAGCAACTATTCAAGAAAACAGTTACGCCGAGCGACGTCAGGAAGTTGAATCAGCCAATGATACCGAAGCAACATGTAGAGAAGCACTTTTCGTTGGGTAGCGACCAAACGTCGCCATGCGTGGCAGCGATGAAGGGAGTGTTGTTGAACTTCAAGGACCGTTTTTGA 402 0.5 MARKRFCDYDVITNFKPFTDTDDDTESEFLKSHSKSEIVDVLCKHTYDDKIQQSMHNERCRHDRKTNMLCRAARVTRCEQLFKKTVTPSDVRKLNQPMIPKQHVEKHFSLGSDQTSPCVAAMKGVLLNFKDRF 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0076 133 PANTHER AP2/ERF AND B3 DOMAIN TRANSCRIPTION FACTOR 2 131 - -
Ssu9g0076 133 SUPERFAMILY DNA-binding pseudobarrel domain 81 110 IPR015300 -
Ssu9g0076 133 Gene3D - 71 133 IPR015300 -
Ssu9g0076 133 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 2 131 IPR044800 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0076 Ssu-Chr9 7211630 7215831 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0076 1 132 B3 DNA Binding Superfamily AT1G25560 46.377 7.57e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0076 K09287 - gmx:732601 127.102