Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0061 ATGAAGAGTTTGTTGGGGTGTGTAGCGATTGTGGAGAAAAATAGACCTTATGTTGCAATGTTGTTTATTCAGTTTGTGTATGCAGGAATGGCCTTGTTGTCTAAGGTTGCAATTTCCAAGGGAATGAGCCCCTATGTGTTTGTTGTTTATAGACAAGCCTTTGCATCAGTTGCCTTATCTCCATTTGCTTTCTTTGACAGCAAGCAATCAGCTCCTTTGTCAGGCAACTTGTTGTGCAAATTGTTTCTAGTTTCCCTTGTTGGGTTAACGGCAAGTTCAAACCTTTACTATGTTTCAATCAACTATACCACTGCAACATTTGCTGCAGCCAGCACAAACACTGTCCCTGCCATTACTTTCATCATGGCTGttttaattagGGTGGAAAGCATTTCCATAAAACGTGTGCATGGGCTGGCCAAGATTTTGGGTTCTATTCTAAGCCTTTCTGGGGCAATTACATTTGCTTTAGTCAAAGGACCTCCCCTGGGTTTTATGAAATGGTGTCAAGAAAATCAGAACCATGGTTCTCACCCTTTAACAATTGTTCACTCCAAAGGTGATTCTACTAGAGGGGCTCTTATGATGCTCTCAGCAAACACTTCATGGTCCTTGTGGCTTATCTTGCAGgGATTTGTTGTGAAGCAGTACCCTGCAAAATTTCGCCTCACTACTGTACAATGCTTCTTTAGCTTCATGCAATCTGCTGTTGTGGCTGTTGCAGTAGAGAGGAATAACCCCTCGGCATGGAGGCTTGGATGGGATATTCATCTTCTTTCTGTGGCTTACTGTGGCATAGTTGTAACAGGTATTTGTTATTGGCTGCAAGTCTGCACAATAGAGACGAAAGGCCCAGTTTTCACAGCAATGTTCACCCCTCTAGCTCTTATAATCACAGCAATATTCTCAGCACTTCTGTGGAAAGAAACACTTTACTTGGGAAGTGTTGGTGGCACTATTTTACTAGTGGTTGGACTCTATAGCGTGCTGTGGGGGAAGAGCAACGAGAGTGTAAAAGGGGAAAACCTAGAAGCTGAACAAACAAAAGAGGAAACCAGATTGGAGTGCATTGTGCAACAATGA 1083 0.4257 MKSLLGCVAIVEKNRPYVAMLFIQFVYAGMALLSKVAISKGMSPYVFVVYRQAFASVALSPFAFFDSKQSAPLSGNLLCKLFLVSLVGLTASSNLYYVSINYTTATFAAASTNTVPAITFIMAVLIRVESISIKRVHGLAKILGSILSLSGAITFALVKGPPLGFMKWCQENQNHGSHPLTIVHSKGDSTRGALMMLSANTSWSLWLILQGFVVKQYPAKFRLTTVQCFFSFMQSAVVAVAVERNNPSAWRLGWDIHLLSVAYCGIVVTGICYWLQVCTIETKGPVFTAMFTPLALIITAIFSALLWKETLYLGSVGGTILLVVGLYSVLWGKSNESVKGENLEAEQTKEETRLECIVQQ 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0061 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 254 334 - -
Ssu9g0061 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 149 - -
Ssu9g0061 360 Coils Coil 335 355 - -
Ssu9g0061 360 PANTHER WAT1-RELATED PROTEIN 13 337 IPR030184 GO:0016021|GO:0022857
Ssu9g0061 360 PANTHER WAT1-RELATED PROTEIN 13 337 - -
Ssu9g0061 360 Pfam EamA-like transporter family 16 149 IPR000620 GO:0016020|GO:0016021
Ssu9g0061 360 Pfam EamA-like transporter family 191 330 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0061 Ssu-Chr9 6268511 6274288 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0061 15 337 Nodulin-like Gene Family AT2G39510 39.198 9.61e-84 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0061 - - gsj:114390241 637.876