Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0052 ATGGGTTGTTGTGGGATTCACATAGCTGAGCAATTTTTGATAGCGGCCATCGTAGTTACTTTACGCAGGTCACATGCTGCTGTTTTTGGAGCCTTTATAGGGTTGGTCTCAATGGCATCTATGATTATAGTTGTTGGTTCAGAGGAGCAAGACACTACGGCCGTCATTCTATCAGGGTTTGTAGTGTTTGTGGCTCAGGCTTGTAGCATAGCCACAGGGGAATTTGTGTCTGGGTCCTCACAATTAGATAGAAAGGTTGCTCCAATGAATGGTGCAATGGTGCCATTACTTGCAACCTCCTTGATAAGGAAATATAAGGTGGGGCTTGGAGTGGTTGTGGCTATTGCAAGCTTTGCTTTGGTGGTGTCTGGTTGGTTATGGGCAATATTGGATAGGGCTCCGGTGTGGAAGTCTGTTATGATGTTCTTGGTTGGGGGTTGGATATATATGGCCTTTCCTTTAGGGCTAAACATGTTGTTTGGGAAAGAGGACTTTGAGTAG 501 0.4531 MGCCGIHIAEQFLIAAIVVTLRRSHAAVFGAFIGLVSMASMIIVVGSEEQDTTAVILSGFVVFVAQACSIATGEFVSGSSQLDRKVAPMNGAMVPLLATSLIRKYKVGLGVVVAIASFALVVSGWLWAILDRAPVWKSVMMFLVGGWIYMAFPLGLNMLFGKEDFE 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0052 166 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 86 161 IPR008217 GO:0005384|GO:0030026
Ssu9g0052 166 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 25 89 IPR008217 GO:0005384|GO:0030026
Ssu9g0052 166 PANTHER VACUOLAR IRON TRANSPORTER (VIT) FAMILY PROTEIN-RELATED 86 161 - -
Ssu9g0052 166 PANTHER VACUOLAR IRON TRANSPORTER (VIT) FAMILY PROTEIN-RELATED 25 89 - -
Ssu9g0052 166 Pfam VIT family 26 83 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0052 Ssu-Chr9 5251430 5252355 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0052 25 161 Nodulin-like Gene Family AT3G43630 43.636 5.20e-33 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0052 K22736 - cit:102630633 126.716