Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0047 ATGGGACCACCTACTGCGAGGCACCTCCGAAGCTTGTCGGTGGAGTCTAACTTCTTCCATGGTCTCGGGTTTGTCGATGGCGACAATGAGAGAGTTGCTGAGAAAAGTGGCGACAAGCGGAGGGTGGGGCACCATCGGCACAACAACTCGATGGACGGGTCCTTGACTACATCATTTGAGGTGAACTCTACGATGGTGATGATGGATGGTGTGAAGAAATCTATGACCCCTGATAAACTCTTTAAGCTTGCTATTACTAATCCAAAGAGAGCTACgagGACTCATGCCAATAGGCAATCTGCTGCTCGATCAAAGGAGAGGATGATTCGTTACGCAAGTGAGTTGGAGAAGAAGGTGCAGACGCTTCAGACTCAACAAACTAACCTCTCTCAACAGCTTACCGTGCTTAAGAAAGAGAATACAGATTTGACTGCAGAGTACGAGGAGCTCAAAATAGAGTTAGAGGCTTTGGAGCAAGAAGCACAGCTTACAGAAGATCTCAAGCAGGCATTGAAGGAAAAACGGCAGCGCCTTAGGGCACAATTGCTGGTAACTCTTCTTTCGGAGGGTTGA 573 0.4782 MGPPTARHLRSLSVESNFFHGLGFVDGDNERVAEKSGDKRRVGHHRHNNSMDGSLTTSFEVNSTMVMMDGVKKSMTPDKLFKLAITNPKRATRTHANRQSAARSKERMIRYASELEKKVQTLQTQQTNLSQQLTVLKKENTDLTAEYEELKIELEALEQEAQLTEDLKQALKEKRQRLRAQLLVTLLSEG 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0047 190 SMART brlzneu 85 149 IPR004827 GO:0003700|GO:0006355
Ssu9g0047 190 Coils Coil 105 181 - -
Ssu9g0047 190 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 87 150 IPR004827 GO:0003700|GO:0006355
Ssu9g0047 190 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 8 181 - -
Ssu9g0047 190 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 8 181 - -
Ssu9g0047 190 MobiDBLite consensus disorder prediction 32 56 - -
Ssu9g0047 190 SUPERFAMILY Leucine zipper domain 89 142 IPR046347 GO:0003700|GO:0006355
Ssu9g0047 190 Gene3D - 88 142 - -
Ssu9g0047 190 CDD bZIP_plant_RF2 90 141 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0047 Ssu-Chr9 5076512 5082128 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0047 6 179 bZIP Transcription Factor Family AT1G43700 45.304 1.06e-42 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ssu9g0047 bZIP_Maf 0.00024 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0047 K20557 - gmx:778142 202.986