Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0046 ATGTCATTCCGATGGTCGACGAGTCAGATGAGTTTGGACAGGAAGGCAAGGTCAGTAGGAGTGGTCGCCATCGGGCACCTCCAGAGCTTGTTGGTGGACTCTAACTTCTTCTACGGTGTTGGGATTGTCGATGGAGATGACGAAAGAGTTGTTGAGAAAAGTGGTGATGAGCAGAGGTTGGGGCATCACTGGCACAACAACTCAATGGACGGGTCCTCGACTATGTTGTTTAAGGTAGACTCAACAATGGTCATGATGGATGGTGTGAAGAAAGCTATGACCCTTGATAAACTCTTTGAGCTTGCTCTTATTGATCCAAAAAGAGCTACGAgCATTCTTGCTGATAGGCAATCTGCTGCTCGATCAAAGGAGAGGAAGATTCGTTATGCAATTGAGTTGATGAGGAAGGTGCAGAGGCTTAGGACTAAAGCAACTAACCTTTCTGCAGAGGTTAACATGCTTGAGAGAGAAACTACAAATATGCCTACAAGGAACAAGGAACTCAAAATGCATTTAGAGGCTTTGAGGGAAGAAGAACGGCTTAGAGAAGATCTCAGGCAGGCAATTAAGGAGGAAGTGCAACGCCTTAGGGAAGAAACTAGTCGTTTGGGTATTGTTGGTTACCCTCCTTTCAATTGA 639 0.4538 MSFRWSTSQMSLDRKARSVGVVAIGHLQSLLVDSNFFYGVGIVDGDDERVVEKSGDEQRLGHHWHNNSMDGSSTMLFKVDSTMVMMDGVKKAMTLDKLFELALIDPKRATSILADRQSAARSKERKIRYAIELMRKVQRLRTKATNLSAEVNMLERETTNMPTRNKELKMHLEALREEERLREDLRQAIKEEVQRLREETSRLGIVGYPPFN 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0046 212 SUPERFAMILY Leucine zipper domain 107 161 IPR046347 GO:0003700|GO:0006355
Ssu9g0046 212 Coils Coil 168 202 - -
Ssu9g0046 212 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 105 168 IPR004827 GO:0003700|GO:0006355
Ssu9g0046 212 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 17 210 - -
Ssu9g0046 212 SMART brlzneu 103 167 IPR004827 GO:0003700|GO:0006355
Ssu9g0046 212 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 17 210 - -
Ssu9g0046 212 CDD bZIP_plant_RF2 108 157 IPR044759 GO:0003700|GO:0006355
Ssu9g0046 212 Coils Coil 130 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0046 Ssu-Chr9 5055063 5065203 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0046 26 197 bZIP Transcription Factor Family AT1G43700 48.333 3.04e-45 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0046 K20557 - gmx:778142 219.164