Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu9g0033 | ATGGATGAATACGCATTGATTGCTTTGAAAAAGGGTGCTCAACTTCTTAAATATGGTCGTAAAGGAAAGCCCAAGTTTTGTCCATTTCAACTTTCCAATGATGAATCATCCTTAATCTGGATTACAAGTAGTGGAGAAAGAAAACTGAAGCTATCTTCTGTCTCTAGAATTATTCCTGGACAAAGAACTGCTGTTTTCCAACGGTACTTGCGTCCTGAGAAGGACTATTTgtctttttcacttatttacagtCACGGAAAGCGATCGCTTGATTTGATTTGCAAAGATAAAGTTGAGGCAGAAGTGTGGATTGCTGGCCTCAAAGCACTGATATCTTCTGGTCAAGGTGGTCGGTCCAAAATTGATGGATGGAGTGATGGGGGCCTCATTCTTGATGATAGCAGAGACTTGACATCAAATAGTCCAAGTGAAAGTTCTGCTAGCACGTCACGAGGCATCAGTTCTCCTGACATTTCTGTCAGTCTTCCAAATACTTCACCAAAGTCCTTTCGACCTGACAATACAATTTCTGAAAGGTCACATGTGCCACCAGACTCAACAAACATGCAAGTGAAAGGATCTGGTTCAGATGCTTTTCGTGTGAGTGTTTCAAGTGCCCCCAGTACATCTAGTCATGGATCTGCACCAGATGACTATGATGCTCTGGGGGATGTATACATATGGGGGGAGGTTTTCTGTGAAAATGTTAAAGTAGGAGCtgataaaaatgtcaattatTTCATCCCGAGGGCAGATGTACTTGTCCCCAGACCACTGGAATCCAATGTAGTTTTAGATGTACATCATATAGCATGTGGTGTTAGACATGCTTCTCTAGTCACTAGGCAAGGTGAAGTTTTTACATGGGGCGAAGAATCGGGAGGACGCCTTGGCCATGGTGTTGGGAAGAATGTGGTTCAACCTCGTCTAGTTGAAGCATTAACTTCTACAACTGTTGATTTTGTAGCCTGTGGGGAGTTCCATTCCTGTGCTGTTACAATGGCCGGGGAACTATATACATGGGGTGATGGTACTCATAATGCTGGGCTTCTTGGTCATGGCAGTGATGTCAGTCATTGGACACCAAAGAGAATTGCAGGTCCATTAGAGGGACTTCAAATTGCATTTGTTGCTTGTGGTCCATGGCACACAGCCTTGATAACTTCAACAGGGCAGCTGTTTACATTTGGTGATGGAACATTCGGTGTCTTGGGCCATGGAGACAGGGAAAGTGTTTCATATCCTAGAGAAGTGGAATCCTTATCAGGATTGAGGACAATAGCTGTTGCATGTGGAGTGTGGCATACTGCAGCTGTTGTAGAGGTTATCGCAACACACTCCAGTACAAGTGTATCATTAGGTAAATTGTTTACTTGGGGTGATGGAGACAAAAATCGCCTTGGACATGGGGACAAGGAGACACATCTTAAACCAACTTGTGTGCCTGCACTTATTGAttacaattttcataaaattgctTGTGGGCACAGTTTGACAGCAGGCCTGACGACATCTGGACGTGTTTTTACTATGGGAAGTACTGTTTATGGTCAGCTCGGGAATCCCCAATCTGATGGAAAGCTTCCCTGCTTGGTTGGAGACAAGATTGCCGGGGAATCCGTTGAAGAAATTGCATGTGGTGCATATCATGTTGCCGtattaacatccaaaaatgaagTGTATACTTGGGGAAAAGGTGCAAATGGAAGATTGGGTCATGGAGATATTGAAGATCGAAAAACACCAGCTTTGGTTGAAGCATTGAAGGATAGACATGTGAAATATATTTCATGTGGTTCAAACTACTCTGCTGCCATATGCCTTCATAAGTGGGTATCTGGTTCTGAGCAGTCTCAGTGCTCTACTTGTAGACAGGCATTTGGCTTCACTAGAAAGAGGCACAATTGTTATAACTGTGGACTTGTCCACTGCCATTCGTGCAGTTCAAGGAAAGCACTAAGAGCAGCACTGGCTCCTAATCCTGGCAAGCCATATCGTGTGTGTGATTCTTGTTATGCAAAATTGAACAAGGTTGCAGAAGCTCGCAATAATAATAGAAGGAATGCCTTGCCTCGTCTGTCAGGTGAAAACAAGGATAGGCTAGACAAGTCTGACCTAAGATTGCCCAAGGCAGTAATTCCTTCTAACATGGATTTGATAAAACAGCTAGATAGTAAGGCAACTAAGCAAGGAAAGAAAGGTGATACATTCTCACTGGTTCGCACTTCACAAGCACCTTCTTTGCTCCAGCTGAAAGATGTTGTCTTGTCCACTGCTTTTGATCTGAGACGAACAGTTCCAAGACCGGTGGTTGCACCATCAGGAGTAAGTTCAAGATCTGTGTCACCTTACTCTAGAAGACCAAGCCCCCCTCGTTCAGCTACGCCTATTCCAACAACTTCTGGACTttccttctccaaaagtattgcTGATAGTTTGAAGAAAACAAATGAACTTTTAAATCAAGAAGTGCAGAAGTTACATGCTCAGGTCGAGAGCCTGAGACAGAGATGTGAACTGCAAGAATTAGAGCTTCAAAGGTCTGCTAAAAAGACTCAAGAAGCTATGGCACTCGCTGCTGAGGAATCTGCGAAATGTAAAGCTGCGAAAGAGGTTATAAAGTCACTCACAGCACAGCTCAAAGATCTGGCTGAGAAGCTTCCTCCTGGAGTTTATGATGCTGAGAACATTAGGCCAGCTTACCTACCAAATGGTCTTGAGCCAAATGGCATCCACCATCTAGATTCAAATGGGGAGCAGCACTCCAGGGCAGAGTCAATCAGTGGCTCTAGTTTGGCCTCCATGGGACTTGAATCCTCTCTATTGAATAGAACAGTGGGGAATTCACCAGGAACTTATGGAACTAATCTTCACCAGCAAATATGGAGCCCCTTGACCTCTAATGGGACCAATAATTATCCAGATGTTAAATTGCCAAATGGTGGTGTGATTCAGGCAAGCAGTGGTAGCATGTCAGACACTGTTGAAGGTAGGGATTCTGGACATTTCCACGACGACGAGAGTGGTTTGAAATCGAGGAATGCTGCACTGGCTGCTAATAGTAATCAAGTTGAGGTAGAATGTATTGAACAGTATGAACCCGGTGTCTACATAACACTTGTGGCACTGCGCGATGGAACAAGAGATCTGAAGCGAGTGCGcttcagCCGAAGGAGATTCGGAGAGCACCAAGCAGAAACCTGGTGGTCAGAGAACAGGGAGAAGGTATATGAAAGATACAACATTTGCACGGACAAGTCTGCCAACCAAGCGGCATGTAGTTCAGAGGGTGCTGGTTTGCCTGTTTCCCAAACTTACGAGAAGTAG | 3327 | 0.4331 | MDEYALIALKKGAQLLKYGRKGKPKFCPFQLSNDESSLIWITSSGERKLKLSSVSRIIPGQRTAVFQRYLRPEKDYLSFSLIYSHGKRSLDLICKDKVEAEVWIAGLKALISSGQGGRSKIDGWSDGGLILDDSRDLTSNSPSESSASTSRGISSPDISVSLPNTSPKSFRPDNTISERSHVPPDSTNMQVKGSGSDAFRVSVSSAPSTSSHGSAPDDYDALGDVYIWGEVFCENVKVGADKNVNYFIPRADVLVPRPLESNVVLDVHHIACGVRHASLVTRQGEVFTWGEESGGRLGHGVGKNVVQPRLVEALTSTTVDFVACGEFHSCAVTMAGELYTWGDGTHNAGLLGHGSDVSHWTPKRIAGPLEGLQIAFVACGPWHTALITSTGQLFTFGDGTFGVLGHGDRESVSYPREVESLSGLRTIAVACGVWHTAAVVEVIATHSSTSVSLGKLFTWGDGDKNRLGHGDKETHLKPTCVPALIDYNFHKIACGHSLTAGLTTSGRVFTMGSTVYGQLGNPQSDGKLPCLVGDKIAGESVEEIACGAYHVAVLTSKNEVYTWGKGANGRLGHGDIEDRKTPALVEALKDRHVKYISCGSNYSAAICLHKWVSGSEQSQCSTCRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVCDSCYAKLNKVAEARNNNRRNALPRLSGENKDRLDKSDLRLPKAVIPSNMDLIKQLDSKATKQGKKGDTFSLVRTSQAPSLLQLKDVVLSTAFDLRRTVPRPVVAPSGVSSRSVSPYSRRPSPPRSATPIPTTSGLSFSKSIADSLKKTNELLNQEVQKLHAQVESLRQRCELQELELQRSAKKTQEAMALAAEESAKCKAAKEVIKSLTAQLKDLAEKLPPGVYDAENIRPAYLPNGLEPNGIHHLDSNGEQHSRAESISGSSLASMGLESSLLNRTVGNSPGTYGTNLHQQIWSPLTSNGTNNYPDVKLPNGGVIQASSGSMSDTVEGRDSGHFHDDESGLKSRNAALAANSNQVEVECIEQYEPGVYITLVALRDGTRDLKRVRFSRRRFGEHQAETWWSENREKVYERYNICTDKSANQAACSSEGAGLPVSQTYEK | 1108 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu9g0033 | 1108 | Pfam | Pleckstrin homology domain | 31 | 111 | IPR001849 | - | |
| Ssu9g0033 | 1108 | ProSiteProfiles | BRX domain profile. | 1026 | 1081 | IPR013591 | - | |
| Ssu9g0033 | 1108 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 336 | 390 | IPR000408 | - | |
| Ssu9g0033 | 1108 | MobiDBLite | consensus disorder prediction | 909 | 929 | - | - | |
| Ssu9g0033 | 1108 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 506 | 557 | IPR000408 | - | |
| Ssu9g0033 | 1108 | Gene3D | - | 348 | 443 | IPR009091 | - | |
| Ssu9g0033 | 1108 | Gene3D | - | 185 | 347 | IPR009091 | - | |
| Ssu9g0033 | 1108 | SUPERFAMILY | RCC1/BLIP-II | 222 | 611 | IPR009091 | - | |
| Ssu9g0033 | 1108 | SUPERFAMILY | PH domain-like | 5 | 111 | - | - | |
| Ssu9g0033 | 1108 | PANTHER | REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-CONTAINING PROTEIN | 8 | 1088 | - | - |
Showing 1 to 10 of 47 entries
Duplication type information
Functional genes information
Pathway information