Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g2520 ATGGCCATGCTTGGCTATGTAGCAGCAATGATTGCAGCACTCCTCTGCATCATATACTTCTTCCATCGGAGACGATGTTGCAGACACCCACTCTTCACAGAATACCCCATCCTTGGCATGCTACCACACGTGCTCTGCAATTTGTGGCGTGCACATGATTACTCAACTGAGGTACTGAAACGACATGGGGGCACGGGTGAGTTCACTGGACCTTGGTTTACCAACATGAACTATTTGGTCACTAGTGACCCCTCCAATGTGCACCACGTCATGAGCAAGAGTTTCCCCAACTACGTCAAGGGACCCGAGTTTCGTGACATTTTTCAAGCCTTCGGAGACGGGATATTCACCACTGATTCTGAGGTATGGAAATACAACAGGGATCTCTTCCATTCTCTCTTTAAACAAAGAAGCTTCGAGGTGTTTCTAGAGAAAACCATTCAGAATAAGGTGCTGAATAGCCTCCTTCCAATATTGGATCATCTACACCAACAAGGGAGGGTGGTGGATCTACAAGATGTCTTCAATCGCTTCACTTTCGATAATATATGTTCTACAGTTCTAGGATACGATCCTAATTGCCTTTCCATTGATTTTCCCCAAGTTGCAATTGAGAAGGCTTTTAACGAAGCTGAAGAGTCCATATTCCACAGACATGTGGTGCCAAAGTTTGTTTGGAAGCTGCAGAAATGGCTTCAAATTGGTCAAGAGAAGAAGATGACAGAAGCATGTAAAACACTTGATCAATTCATACATGCACGTATAGCGACTAAGCGGGAAGAGCTAAGCAAGTACAACGAAACTGAAACGGCTGAAGCTCAGGTTGACTTGCTAACAGCTTTGATGAGAGAATTAGGAAAGGGACAAGCACAAGCACATGACGATGGATTTCTACGGGATGCTGTGTTCAATCTTTTTGTGGCTGGGAGAGATACTATAACTTCAGCTCTCACGTGGTTCTTCTGGCTTGTTGCTACAAACCCCTTAGTGGAAGCCAAGATTCTTGAAGAGATCAAAGAGAAGTTTGGGACCAACCAAAAGTCGTCGCTAGGGGTTTTACGCGTGGAGGAAGTGAAAAAGCTAGTTTATCTCCACGGTGCTATATGTGAAGCATTGCGTCTCTTTCCTCCTATACCTTTTGAGCGCAAGCAAGCAATTAAAGCTGACATGCTTCCTAGTGGCCATCGTGTCAATCCCAGTaccatgatattattttttttgtatgcaATGGGAAGATTTGAAGAGATATGGGGAAAAGATTGTTTGGAGTTCAAGCCAGAGAGATGGATCTCACAGAAAGGAGGTATTGTTTATGTACCATCTTACaaatttattgcttttaatgcAGGACCCAGGACTTGCTTGGGCAAAGACTTGTCGTTCTTTCAAATAAAGATGGTGGCAGCTGCTATTTTGCGCAATTACCGTGTCCAACTGGTCGAAGGTTATGTTGCTACCCCAAGCCTTTCGATTGTTCTTCTTATGAAGGATGGTTTGAAGGTAAAgataacaaaaagagaaatttaa 1527 0.425 MAMLGYVAAMIAALLCIIYFFHRRRCCRHPLFTEYPILGMLPHVLCNLWRAHDYSTEVLKRHGGTGEFTGPWFTNMNYLVTSDPSNVHHVMSKSFPNYVKGPEFRDIFQAFGDGIFTTDSEVWKYNRDLFHSLFKQRSFEVFLEKTIQNKVLNSLLPILDHLHQQGRVVDLQDVFNRFTFDNICSTVLGYDPNCLSIDFPQVAIEKAFNEAEESIFHRHVVPKFVWKLQKWLQIGQEKKMTEACKTLDQFIHARIATKREELSKYNETETAEAQVDLLTALMRELGKGQAQAHDDGFLRDAVFNLFVAGRDTITSALTWFFWLVATNPLVEAKILEEIKEKFGTNQKSSLGVLRVEEVKKLVYLHGAICEALRLFPPIPFERKQAIKADMLPSGHRVNPSTMILFFLYAMGRFEEIWGKDCLEFKPERWISQKGGIVYVPSYKFIAFNAGPRTCLGKDLSFFQIKMVAAAILRNYRVQLVEGYVATPSLSIVLLMKDGLKVKITKREI 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g2520 508 PANTHER CYTOCHROME P450 FAMILY PROTEIN 9 506 - -
Ssu8g2520 508 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2520 508 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2520 508 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2520 508 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2520 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Ssu8g2520 508 PANTHER CYTOCHROME P450 9 506 - -
Ssu8g2520 508 Pfam Cytochrome P450 41 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2520 508 SUPERFAMILY Cytochrome P450 34 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2520 508 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2520 508 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2520 508 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2520 508 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2520 508 Gene3D Cytochrome P450 20 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g2520 Ssu-Chr8 65143379 65144905 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g2520 7 506 Cytochrome P450 AT4G32170 46.016 6.43e-164 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g2520 - - gmx:100779590 865.914