Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g2518 ATGACAGAAGCATGTAAAACACTTGATCAATTCATACATGCACGTATAGCGACTAAGCGGGAAGAGCTAAGCAAGTACAACGAAAGTGAAACGGCTGAAGCTCAGGTTGACTTGCTAACAGCTTTGATGAGAGAATTAGGAAAGGGACAAGCACAGGCACATGACGATGGATTTCTACGGGATGCTGTGTTCAATCTTTTTGTGGCTGGGAGAGATACTATAACTTCAGCTCTCACGTGGTTCTTCTGGCTTGTTGCTACAAACCCCTTAGTGGAAGCCAAGATTCTTGAAGAGATCAAAGAGAAGTTTGGGACCAACCAAAAGTCGTCGCTAGGGGTTTTACGCGTGGAGGAAGTGAAAAAGCTAGTTTATCTCCACGGTGCTATATGTGAAGCATTGCGTCTCTTTCCTCCTATACCTTTTGAGCGCAAGCAAGCAATTAAAGCTGACATGCTTCCTAGTGGCCATCGTGTTGATCCCAGTACcatgatattattttctttgtacgCAATGGGAAGATTTGAAGAAATATGGGGAAAAGATAGTCTGGAGTTCAAGCCAGAGAGATGGATCTCACAGAAAGGAGGTGTTGTTTATGTGCCATCTTACAAATTCATTGCTTTTAATGCAGGACCCAGGACTTGCTTGGGCAAGGATTTGTCCTTCATTCAAATGAAGATGGTGGCAACTGCTATTTTGCACAAGTATCGTGTCCAAGTGGTGGAGGGTTATGTTGCTACCCCAAGCCTTTCAATTGTTCTTCTCATGAAGGACGGTTTGAAGGTAAAGATAACgaaaagagaaatttaa 810 0.4185 MTEACKTLDQFIHARIATKREELSKYNESETAEAQVDLLTALMRELGKGQAQAHDDGFLRDAVFNLFVAGRDTITSALTWFFWLVATNPLVEAKILEEIKEKFGTNQKSSLGVLRVEEVKKLVYLHGAICEALRLFPPIPFERKQAIKADMLPSGHRVDPSTMILFSLYAMGRFEEIWGKDSLEFKPERWISQKGGVVYVPSYKFIAFNAGPRTCLGKDLSFIQMKMVATAILHKYRVQVVEGYVATPSLSIVLLMKDGLKVKITKREI 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g2518 269 Gene3D Cytochrome P450 1 266 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2518 269 Pfam Cytochrome P450 2 261 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2518 269 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 267 - -
Ssu8g2518 269 PRINTS E-class P450 group I signature 215 238 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2518 269 PRINTS E-class P450 group I signature 205 215 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2518 269 PRINTS E-class P450 group I signature 126 144 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2518 269 PRINTS E-class P450 group I signature 58 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2518 269 PRINTS E-class P450 group I signature 78 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2518 269 PRINTS P450 superfamily signature 206 215 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2518 269 PRINTS P450 superfamily signature 127 138 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2518 269 PRINTS P450 superfamily signature 69 86 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2518 269 PRINTS P450 superfamily signature 215 226 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2518 269 PANTHER CYTOCHROME P450 1 267 - -
Ssu8g2518 269 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 208 217 IPR017972 GO:0005506|GO:0016705
Ssu8g2518 269 SUPERFAMILY Cytochrome P450 2 267 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g2518 Ssu-Chr8 65084163 65084972 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g2518 1 267 Cytochrome P450 AT4G39490 48.921 5.33e-89 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g2518 - - gmx:100792360 456.832