Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g2517 ATGGCCATGCTTGTCTATGCACCCATAATTGCATCATTTCTATGCTTCGTATACTTCTTCCATCGGAAAAGATGCTGCAAACACCCCCTCATGAGGGACTATCCCATCCTTGGCATGTTACCACCGGTCCTCTTCAACTTGTGGCGGATCCATGATTTTTGCACTGAGGTGCTGAAACGACGTGGTGGCTCTGGGGAGTTCAAAGGACCATGGTTCACCAAAATGAACTATTTGGTCACTTGTGACTCCCTCAACGTGCAACACATGCTGTGCAAGAGCTTTGACAACTACGTGAAGGGACCTGAGTTTCGTGAGATTTTCGAACCCTTCGGAGATGGGGTTGTCACTGCTGATTCAGAAACGTGGAAGTACGTCAGAACCCTGCTCCATTCCCTGATCAAACAAAGAAGGTTCGAAGCGTTTGTCGATAAAACCGTTCAGAAGAAGGTGCAGACAAGCCTGCTTCCAATATTGGATCACGTACGACAACAAGGGACGTTGGTGGATCTTCAAGATGTCTTCAACCGATTCACATTTGATAACATATGCTCCACAATTGTAGGGTACGATCCTAAGTGTCTTTCCATTGACTTCCCCGAAGTTGCAATTGAGAGGGCTTTTAATGAGACTGAAGAGTCGATATTCTACAGACACACAGTGCCAAGCACTGTTTGGAAGTTTCAGAAATGGCTCCAAATTGGTCAAGAGAAGAAGATGACAGAAGCATGCAGAACGTTCGATGAGTTCATATATTCATGCATAGCGTCCAAGCGTGAAAAGCTAAGCAAAGAAGAAATGGAGGACGAGGCTCCCTTTGACTTGCTTACAGCTTTGATCACAGCAGAGAGAGGACGTGTGCATGATGATAAGTTTCTAAGGGATGCTGcgtttaacttttttgtagcGGGGAGAGAAACCATGACTTCGGCTCTCACGTGGTTGTTTTGGCTTGTTACTAAACACCCTTTAGTGGAGGCCAAGATTCTTGAAGAGATCAAAGATAATTCTAAGGGCAATGATGGGGGGGTTTTAGGCATGGAAGAGGTGAAAAAGCTAGTTTATCTGCATGGTGCTTTGTGTGAAGCTCTAAGACTTTTCCCTCCCGTGCCTATTGAGCGCAAGCAAGTAATTAAAGCTGACACGCTTCCCAGTGGTCACCGTGTTGATCCCAATACAATGatattgttttctttgtatGCAATGGGGAGGTTTGAAGAGATATGGGGAAAAGATTGCTTGGAGTTCAAGCCAGAGAGATGGGTATCTGAGAGAGGAGAGGTTGTTTATGCACCATCTTAcaagttcatttcttttaatgCGGGACCCAGAATCTGCTTGGGGAAAGACTTGGCTTTCCTTCAAATGAAGATAGTGGCGGCTACTATTTTGCGCAACTATCGTTTCCAAGTGGTGGAAGGTCATCTTGCTACTCCAAGCCATTCAATTATCCTTCTCATGAAGAATGGTTTGAAGGTTAGGATAACAAAAAGGGAAGTATGA 1500 0.438 MAMLVYAPIIASFLCFVYFFHRKRCCKHPLMRDYPILGMLPPVLFNLWRIHDFCTEVLKRRGGSGEFKGPWFTKMNYLVTCDSLNVQHMLCKSFDNYVKGPEFREIFEPFGDGVVTADSETWKYVRTLLHSLIKQRRFEAFVDKTVQKKVQTSLLPILDHVRQQGTLVDLQDVFNRFTFDNICSTIVGYDPKCLSIDFPEVAIERAFNETEESIFYRHTVPSTVWKFQKWLQIGQEKKMTEACRTFDEFIYSCIASKREKLSKEEMEDEAPFDLLTALITAERGRVHDDKFLRDAAFNFFVAGRETMTSALTWLFWLVTKHPLVEAKILEEIKDNSKGNDGGVLGMEEVKKLVYLHGALCEALRLFPPVPIERKQVIKADTLPSGHRVDPNTMILFSLYAMGRFEEIWGKDCLEFKPERWVSERGEVVYAPSYKFISFNAGPRICLGKDLAFLQMKIVAATILRNYRFQVVEGHLATPSHSIILLMKNGLKVRITKREV 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g2517 499 PANTHER CYTOCHROME P450 FAMILY PROTEIN 8 497 - -
Ssu8g2517 499 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2517 499 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2517 499 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2517 499 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2517 499 Pfam Cytochrome P450 65 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2517 499 Gene3D Cytochrome P450 18 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2517 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Ssu8g2517 499 SUPERFAMILY Cytochrome P450 18 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2517 499 PANTHER CYTOCHROME P450 8 497 - -
Ssu8g2517 499 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2517 499 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2517 499 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2517 499 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g2517 Ssu-Chr8 65048672 65050171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g2517 1 498 Cytochrome P450 AT2G23180 44.834 7.46e-163 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g2517 - - gmx:100780625 915.605