Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g2490 ATGtctccttattctctctctttgttaGCCTCTCTGAACCCCAAAATGCACACCCTTTCTTTGTCACTCTTTCCTTCAACTCCACATGTTCCAAACCACATAACCACACCCAAGTTCCCTCCTCCCCTCTCTCATTCccacctttcttcttcttcttcttcttcttcaccacTCAGTCTCACCATCGATGGACTTCCATGCCCATCTCATTCTTTCCTCCTCAGTGCTAGAaagtcttttccttttctcgtTTCCACCCCAAAATTTGCATCTTTCAGAGTCCTTGCTGCTTCTCTGCCTGAGGCTGGAAGTGATGAACCAACCAAATCAAGTAGTATGGTAAAGACTCTGCAGCTTGGGGCCATGCTTGCAACTTGGTACCTTTTGAATATCTACTTCAACATCTACAACAAACAGGTTCTAAAAGTCTATCAATTTCCAGCAACAGTTACAGCATTTCAATTTGGCTTTGCAACTTTGATGATTAATTTGATCTGGACTTTGAATCTCCATCCCAGACCAAACATCAGTGGTTCAGAGATTGCAGCAATTCTTCCACTGGCTGTGGCTCACACAATGGGGAACCTCTTGACCAACATTAGTCTTGGCAAGGTTGCTGTATCTTTTACTCACACAATCAAAGCTATGGAGCCTTTCTTCACTGTTGTACTTTCTGCTCTCTTCCTGGGTGAGAGGCCCACTTTCTGGGTGGTTTCTTCCCTTGTACCAATAGTGGGGGGAGTGGCACTGGCATCAAGGACTGAAGTCTCTTTCAATTGGATTGGGTTCTCCACTGCTATGGCATCTAACCTCACCAATCAATCGCGGAATGTTTTGAGCAAAAAATTGATGACTAATGAAGAGGAAACTTTGGACAATATAAATCTCTACTCAGTTATAACCATTATTTCCTTTATCCTGTTGGTCCCATTCGCTATACTTGTGGAGGGTGTCAAGTTTACTCCTTCATACCTGCAATCTGCTGCAGGGCTGAATGTTAGAGTGCTATGTGTCAGATCAGTTTTGGCAGCGCTCTGCTTCCATGCATATCAGCAGGTTTCTTATATGATATTACAGATGGTGTCCCCTGTGACCCACTCGGTTGGAAACTGTGTGAAGCGTGTGGTTGTCATTGTTTCTTCAGTTATCTTCTTCCAAACTCCTGTCTCACCCGTTAACACACTTGGAACTGGTGTTGCACTTGTTGGAGTTTTCTTGTACTCAAGGGCAAAGCGGATTAAGCCAGTGCCAAAGACAAATTGA 1263 0.4157 MSPYSLSLLASLNPKMHTLSLSLFPSTPHVPNHITTPKFPPPLSHSHLSSSSSSSSPLSLTIDGLPCPSHSFLLSARKSFPFLVSTPKFASFRVLAASLPEAGSDEPTKSSSMVKTLQLGAMLATWYLLNIYFNIYNKQVLKVYQFPATVTAFQFGFATLMINLIWTLNLHPRPNISGSEIAAILPLAVAHTMGNLLTNISLGKVAVSFTHTIKAMEPFFTVVLSALFLGERPTFWVVSSLVPIVGGVALASRTEVSFNWIGFSTAMASNLTNQSRNVLSKKLMTNEEETLDNINLYSVITIISFILLVPFAILVEGVKFTPSYLQSAAGLNVRVLCVRSVLAALCFHAYQQVSYMILQMVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPVNTLGTGVALVGVFLYSRAKRIKPVPKTN 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g2490 420 PANTHER SOLUTE CARRIER FAMILY 35 31 414 - -
Ssu8g2490 420 PANTHER PHOSPHOENOLPYRUVATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 31 414 - -
Ssu8g2490 420 SUPERFAMILY Multidrug resistance efflux transporter EmrE 303 412 - -
Ssu8g2490 420 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 117 417 IPR004696 GO:0016021|GO:0022857|GO:0055085
Ssu8g2490 420 SUPERFAMILY Multidrug resistance efflux transporter EmrE 156 254 - -
Ssu8g2490 420 Pfam Triose-phosphate Transporter family 117 408 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g2490 Ssu-Chr8 64630936 64638003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g2490 52 419 Antiporters AT5G33320 62.772 2.92e-154 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g2490 K15283 - gmx:100819280 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g2490 8 64630936 64638003 Ssu8g2490 8 64630936 64638003 ECH