Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g2475 ATGTCAGTGATAGTGAGGAATGAGGAAAATCAATTATTGCTCCTATGCAAGGGTGCAGACAGTGTAATGTTTGAAAGGCTCTCACAACATGGAAGACAGTTCGAGGCTGAAACCAGGGATCATATCAAAAGATATGCTGAGGCTGGTTTAAGAACCCTTGTAATCACATACCGTGAACTTGATGAAGAAGGATATAAATTGTGGGACAAGGAGTTTACAAAGATCAAAACTACTGTATCACAAGACCGAGATGTGCTGGTGGATGCAGCTGCTGACAAGATGGAAAGGGATTTGATACTTCTTGGTGCTACAGCAGTTGAGGATAGACTGCAAAAGGGGGTTCCTGAATGTATTGAAAAGCTTGCCCAAGCAAAAATCAAaaTAGAATTGTTAGAAGTGACTATGataaaACCTGAATGTGGTATCAGATATTAA 435 0.4 MSVIVRNEENQLLLLCKGADSVMFERLSQHGRQFEAETRDHIKRYAEAGLRTLVITYRELDEEGYKLWDKEFTKIKTTVSQDRDVLVDAAADKMERDLILLGATAVEDRLQKGVPECIEKLAQAKIKIELLEVTMIKPECGIRY 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g2475 144 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED 1 132 - -
Ssu8g2475 144 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 132 - -
Ssu8g2475 144 Gene3D - 102 136 IPR023214 -
Ssu8g2475 144 Gene3D - 1 101 IPR023299 GO:0000166
Ssu8g2475 144 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 1 114 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g2475 Ssu-Chr8 64294441 64307997 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g2475 1 131 Primary Pumps ATPases AT3G27870 72.519 2.89e-61 201