Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g2474 ATGTTGTATGGATATCTAATTCCGATATCACTTTATGTGTCCATAGAAATTGTGAAAGTTCTGCAGAGCATTTTCATCAACCAAGACCAGGAAATGTATTATGAAGATAAAGAGTCAGGAGAAATTTCCTATGAAGCTGAGTCACCAGATGAAGCAGCTTTTGTCATAGCTGCAAGGGAGCTTGGTTTTGCAAGAACACAAACAAGCATATCATTGCATGAATTGAATTATGAAAGTGGAATAAAGGATCATATCAAAAGATATGCTGATGTTGGTTTAAGAACCCTTGTAATCACATACCATGAACTTGATGAAGAAGAATATGAGTTATGGGACAAGGAGTTTTCAGGGATCAAAGCTTCTGTAACAGCAGACCAAGATGCACTGGTGGATGCATCTGCCGCTAAGATGGAAAGAGATTTGATACTTCTTGGTGCTACTGCAGTTGAGGATAGACTGCAAAAGGGgTTAATGAAGTTTATTCTGTTTACTTGA 495 0.3758 MLYGYLIPISLYVSIEIVKVLQSIFINQDQEMYYEDKESGEISYEAESPDEAAFVIAARELGFARTQTSISLHELNYESGIKDHIKRYADVGLRTLVITYHELDEEEYELWDKEFSGIKASVTADQDALVDASAAKMERDLILLGATAVEDRLQKGLMKFILFT 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g2474 164 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 36 79 - -
Ssu8g2474 164 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 77 159 - -
Ssu8g2474 164 Gene3D - 73 151 IPR023299 GO:0000166
Ssu8g2474 164 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 37 - -
Ssu8g2474 164 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 77 159 - -
Ssu8g2474 164 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 36 79 - -
Ssu8g2474 164 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g2474 Ssu-Chr8 64264502 64266536 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g2474 1 38 Primary Pumps ATPases AT3G27870 86.842 3.80e-16 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g2474 K01530 - zju:107415297 145.976