Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g2441 ATGGATCTTGAGTGTGTGATCCACAGGAAAACAATTAAGGAAGAATCATGGAAGACAGTGTTGACTTTGGCTTACCAAAGCTTGGGGGTTGTGTATGGAGACTTGAGCACTTCCCCACTTTACGTTTACAAAAGCACTTTTGCTGAGGATATTCAGCATTCGGAGACCAATGAAGAAATCTATGGGGTGTTGTCTTTTGTGTTCTGGACCCTCACGCTGATTCCGCTGCTCAAGTATGTGTTCATTGTGCTGAGAGCTGATGACAATGGTGAGGGAGGGACCTTTGCTCTCTACTCCTTGCTGTGCCGCCACGCCAGGGTTAGCTTGTTGCCTAACTCTCAGCTTGCGGATGAGGACTTAACGGAGTACACCATAGACAATGGAACTGTTCCTATCGATAAGAAAAATGTTGGGTTGGGGTTGAAGTCCTTGTTGGAGAAACACAGGGTGCTGCAAAGGGTGCTGCTTGTTTTGGCCTTGATAGGGACTTGCATGGTTATTGGGGATGGTGTGCTCACACCAGCACTTTCTGTTTTTTCTGCCGTCTCAGGTTTGGAGCTTTCCATGTCTAAAGAACAGCACAGATATGTGGAGGTTCCAGTGGCCTGTATAATACTGGTATTTTTGTTTGCCCTTCAACATTATGGCACACACCGTGTGGGATGTCTTTTTGCACCTGTTGTCATGACCTGGCTGCTGTGCATCAGTGCTATTGGTATTTATAATATCTTCCATTGGAATCCACATGTTTATCAAGCTCTCTCCCCATATTACATGTTCAAATTTCTGAAAAAGACCCAAAAGGGAGGATGGATGTCCTTGGGTGGGATTTTACTTTGTATAACAGGTATGGAGCAAGTGATAATCAATGGCTTTAACAAAAAGTCATTTTGCCTGCAGATTGCGTTCACATTTTTGGTATACCCTTCCTTAATCCTAGCATATATGGGGCAAGCTGCATATCTTTCAAGACATCATTCTCTTGAAAGTGACTATCGAATTGGGTTCTATGTATCTGTACCTGTAAAACTTAGATGGCCTGTCCTTGCAATCGCCATACTTCAAGCTGTGGTTGGAAGTCAAGCTGTCATCACAGGGACCTTCTCAATAATCAAACAATGTTCTGCTTTGGGATGTTTCCCCAAAGTCAAAATCATTCACACATCATCCAAGATGCATGGCCAGATTTACATTCCTGAGATCAACTGGAGTTTGATGCTACTTTGCCTGGCTATTACAGTTGGATTTAGAGATACTAAACGCATGGGAAATGCATCAGGATTGGCTGTAATAACTGTCATGCTGGTGACCACTTGCTTAATGTCTCTAGTTATAATCTTGTGCTGGCACAAGAACATTTTGCTAGCAGTTTGCTTCATATTGTTCTTTGGCTCCATTGAAGCACTCTATTTCTCAGCATCCCTCATCAACATAGCTGAATTCATCAGATCAGACGCCTCTGAATATGGCTTAGGACTTGGCAGTTTTGAAGAAGATACAAAGATGACAGTTGTTGGGACTTCAGCATCAAACTTAGAGGGTGCAATAAGGATGTCTGAAGATGATCAAGAAGATTCTCAAATGGAAGGCCCTTCTTCAGAATTGATGGAGGTTAAGTCTCCTGAGAAAGTGAGGAAGAGAGTGAGGTTTGTTGTGCCAGACAGTCCACAGATTGATTTGGATGCAAGGGAGGAGTTGATTGAGCTAATGGAAGCGAAAGAGGCAGGAATGGCATTCATACTGAGTCACTCATATGTTAGAGCAAAAAGTGGATCAAGCTGGCTAAAACAAGTTGTTATCAATTATGGGTATGATTTCTTAAGGAGAAACTCTAGAGGACCAACATATGCTTTAAGTATACCTCATGCATCTACCTTAGAGGTGGGCATGATCTATCATGTATGA 1905 0.4278 MDLECVIHRKTIKEESWKTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSETNEEIYGVLSFVFWTLTLIPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVSLLPNSQLADEDLTEYTIDNGTVPIDKKNVGLGLKSLLEKHRVLQRVLLVLALIGTCMVIGDGVLTPALSVFSAVSGLELSMSKEQHRYVEVPVACIILVFLFALQHYGTHRVGCLFAPVVMTWLLCISAIGIYNIFHWNPHVYQALSPYYMFKFLKKTQKGGWMSLGGILLCITGMEQVIINGFNKKSFCLQIAFTFLVYPSLILAYMGQAAYLSRHHSLESDYRIGFYVSVPVKLRWPVLAIAILQAVVGSQAVITGTFSIIKQCSALGCFPKVKIIHTSSKMHGQIYIPEINWSLMLLCLAITVGFRDTKRMGNASGLAVITVMLVTTCLMSLVIILCWHKNILLAVCFILFFGSIEALYFSASLINIAEFIRSDASEYGLGLGSFEEDTKMTVVGTSASNLEGAIRMSEDDQEDSQMEGPSSELMEVKSPEKVRKRVRFVVPDSPQIDLDAREELIELMEAKEAGMAFILSHSYVRAKSGSSWLKQVVINYGYDFLRRNSRGPTYALSIPHASTLEVGMIYHV 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g2441 634 TIGRFAM kup: potassium uptake protein 23 479 IPR003855 GO:0015079|GO:0016020|GO:0071805
Ssu8g2441 634 PANTHER POTASSIUM TRANSPORTER 6 476 634 - -
Ssu8g2441 634 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 477 IPR003855 GO:0015079|GO:0016020|GO:0071805
Ssu8g2441 634 Pfam K+ potassium transporter 25 479 IPR003855 GO:0015079|GO:0016020|GO:0071805
Ssu8g2441 634 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 476 634 IPR003855 GO:0015079|GO:0016020|GO:0071805
Ssu8g2441 634 PANTHER POTASSIUM TRANSPORTER 6 1 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g2441 Ssu-Chr8 63639082 63644770 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g2441 471 632 Inorganic Solute Cotransporters AT5G14880 55.814 6.68e-43 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g2441 K03549 - gmx:100793387 882.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g2441 8 63639082 63644770 Ssu8g2441 8 63639082 63644770 ECH