Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g2436 ATGGCAAGAGGATGGTCCTTTTACAGGGATTTGCTGCCAGTTGTGGTGCTTGTAGGCAATGAATGCAATGACACGGGCTTACTCACACTGTTCAAAGCAGCCACACTGCAAGGGATGAACAACCATGTCTTTGTGGCCTATGCTTATGCTGTTGCCACCACTATACTCCTTCCTGTCACTTTTTTCCACAGAAGAACAAGAGTGGTTCCTCCACTTAGTTTCTCCACAATATCCAAAATCTTTCTTCTTGGGGTGATTGGAAGTTCATCTCAGATACTGGGTTATGCTGGCATTAGCTACAGTTCTCCAACACTCGCTTCATCAATCGCCAATCTAGTGCCTGCCTTCACCTTCACCCTTGCCGTCATTTTCAGGATGGAAAAGTTAGCTGCAAAAAGTAGAAGTAGTCAAGCTAAGGTAATGGGAAGCATAATATCAATAGCAGGCACATTTGTATTGACTTTGTACAAAGGACCACCAATCATCAACGCTCACACACATCTTTCCTTACTACTCCAACAACCAATTAACTTTCTTAAATCAGAGGATGCAAGTTGGGCCATTGCTGGCATTCTGCTGATAGCTGACTACTTTCTGATTTCAATATGGTACATTTTACAGGCATATATCTTGAAAGTGTTCCCGGATGAACTTACTATAGTTTTCTTTTACAACGTGGCTGCCACCATTACCTCTACTACTGTAGGTTTATTTGTAGTACCAAATGCTAGCGCTTGGACAATAGGACTAAATATTTCACTAATCTCCATTGTTTGCTCGGGAATATTTGGAAAGTTAGTGAGCAGTGTAGTTTATGTTTGGGCACTACACTTAAAGGGGCCTGTCTATGTAACATCGTTCAAGCCACTCCAAATTGTTATTGCTGTTGCCATGGGTGTTATGTTCCTTGATGATACTCTTTACATTGGAAGTATAGTTGGAGCTACAATAATATCAATTGGCCTTTATGCTGTATTGTGGGGCAAAGCAATAGAAGATATAGAGGAAGATGTTGGTAGCCCGGAATCATCAACTACTGAGAATGTTCATCTCTTGAGAAGCTACATAATTGAAACttctaaaaagaaaacagatggaaatgtttaa 1107 0.4011 MARGWSFYRDLLPVVVLVGNECNDTGLLTLFKAATLQGMNNHVFVAYAYAVATTILLPVTFFHRRTRVVPPLSFSTISKIFLLGVIGSSSQILGYAGISYSSPTLASSIANLVPAFTFTLAVIFRMEKLAAKSRSSQAKVMGSIISIAGTFVLTLYKGPPIINAHTHLSLLLQQPINFLKSEDASWAIAGILLIADYFLISIWYILQAYILKVFPDELTIVFFYNVAATITSTTVGLFVVPNASAWTIGLNISLISIVCSGIFGKLVSSVVYVWALHLKGPVYVTSFKPLQIVIAVAMGVMFLDDTLYIGSIVGATIISIGLYAVLWGKAIEDIEEDVGSPESSTTENVHLLRSYIIETSKKKTDGNV 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g2436 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 157 - -
Ssu8g2436 368 PANTHER WAT1-RELATED PROTEIN 5 355 - -
Ssu8g2436 368 PANTHER WAT1-RELATED PROTEIN 5 355 IPR030184 GO:0016021|GO:0022857
Ssu8g2436 368 Pfam EamA-like transporter family 28 154 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g2436 Ssu-Chr8 63572010 63577820 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g2436 4 358 Nodulin-like Gene Family AT5G40240 48.333 1.07e-114 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g2436 - - gmx:100790743 573.933